Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0256 ATGAGGACTTTCTTCACCGCAGAGTCGTGTAAAGAAGCACACCATAGTGCTTTGAATCCACAGTCCTGGCTCCAAGTTGAAAGAGGGAAGCTTCCCAGATTGTCATCACAGTCCTCTTCTGCATCAATAGAATCCCTAATCAAGGTCCCACAGTCACCGATACTCCCATTCTTCAAACCTGTTGATTATGTGGAAGTCTTAGCTCAAATCCATGAAGAACTTGAATCTTGTCCTCCACAGGAACAATCAAATCTGTTTTTGTTACAATACCAGGTCTTTAAGGGCCTGGGGGATGTCAAACTGATGCGTAGAAGCCTCCGGTCAGCTTGGCAGAGAGCAAACACTGTTCATGAGAAAATTATATTTGGGGCATGGCTGAAGTATGAGAAGCAAGGAGAAGAATTAGTTGCTCAGTTGCTCACAGCTTGTGGTAAATGTGAAAAGGAATTTGGACCCATAGATGTAGAATCTCATATTCCTTTTGATAAAAATGTAAGTTCCCAAGATAGAGCTTTGATGAATGGGAACGATGCTTCAGAATATGTTATCTTTAAAATTGGAGATGAGAAGATAGTCTGTGATAGACAAAAGATTTCTGAACTTTCAGCACCATTCCATGCAATGCTAAAGGGTTGTTTCAGGGAATCACTTTCTGAGACTATAGATTTGTCTGAAAACAATCTCTCTCCTTCAGGTATGAGGGCAGTAAGTTATTTCAGCTTGACAGACAGTTTACTTGACGTCCCTCCAAATCTTTTGGTGGAAATATTAGCTTTTGCAAATAAGTATTGTTGCGAAGGACTAAAACAGGCTTGTGACAGAAGACTTGCATCCTTAGTTTCCTCCAGAGAAGATGCACTGGAACTCATGGAATATGCTGTTGATCAGAATTCAGCTGTCCTTGCGGCTTCTTGTTTACAAGTTCTTTTACGTAATATTCCCAAATGCTTGAGTGACAATCGGGTTGTGGAGTTATTTATTCATGCTAATAAACAGCAGTTGGCAGTCATGGTTGGGCCTGGTATATTTTCACTTTTCTGTTTCTTGAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTCATTTCCTGGAACGGTTAGTTGATTTTGCTGAAAATGACAAGCAGAGACTGCTGGCATTTCATCAATTGGGATGTGTAAGACTCTCAAGGAAAGAATATGATGAAGCCTATTGTCTTTTTGAGAGGGCTTTAAATGTAGGTCATATTTATTCTGTTGCGGGTTTAGCTAGACTGGACTCTATAAAGGGTGAGAAACTTTTATCTTATGAGAAGATCAGCTCAGTCATTTCTTCTGTTACTCCACTTGGATGGATGTACCAGGAAAGATCACTATACTGTGATGGTGATTTGAGGCGGAAAGACCTTGAGAAAGCAACTGAACTGGATCCTACTCTTATATATCCCTACATGTATAGGACTGCCTCTTTAATGAAGTCAGGGAATGTTCAAGTTGCACTGGCTGAAATCAACCGGATTCTTGGCTTCAAACTTTCATTAGAGTGCTTGGAACTGCGGTTTTTTATCTATCTGGTCCTTGAGGACTACAAAGCAGCGCTCCGAGATGTTCAAGCAATTCTTTCCCTGTGTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATCTCAGCTCTGTACTCTTGTGCGTGAGCATGTCGAACATTGGACAACAGCAGATTGTTGGGTCCGATTATATGACTGTTGGTCTGCTGTTGATGATATTGAGTCTCTATCTGTCATCTACCAGATGCTTGAATCTGATGTAGCAAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTCAGGCTAAACTGTCCTGAGGCTGCCATGCGGAGTTTACAGTTAGCTTGGCAACATGTATCAAGTGAGCATGAAAGACTTGTATATGAGGGCTGGATCTTGTATGATACAGGTCATTGTGAGGAAGGGCTTCAAAAAGCTGAAGAGTCTATTAGTATTAAAAGGTCTTTTGAGGCCTACTTCCTGAAGGCCTATGCATTGGCCGACTCCAGTTTAGATTCATCATGTTCTTCAACTGTTATTTCTCTTCTGGAAGATGCCTTGAGGTGTCCTTCTGATAATCTGCGCAAAGGTCAGGCTCTAAACAATCTTGGAAGTGTTTATGTTGATTGTGGGAAATTGGAGTTAGCAGAAGATTGCTATATCAAGGCCCTTAAAATCCAGCACACCCGAGCCCATCAGGGTCTTGCTCGTGTTCATTTTCTAAAAAATGATAAGGCTGCCGCTTACAAGGAAATGACCAACCTTATTGAGAAGGCAAGAAACAATGCATCAGCATATGAGAAGAGGTCTGAGTATGGTGATCGTGAAATCACAAAGGCAGATCTGGAGATGGTGACTAGATTAGATCCACTTCGGGTGTATCCTTACAGATATCGAGCAGCAGTTCTGATGGACAGCCATAAGGAAGAGGAAGCCATTGCGGAACTCTCTAGAGCAATTGCATTCAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTCCATGAACACAAGGGGGATGTTTTAGGTGCACTAAGAGACTGTCGTGCTGCTCTCTCAGTGGATCCATTCCATCAAAAAATGTTAGAACTTCACTGTCGTGTCAATAGCCACGAGCCATGA 2664 0.4185 MRTFFTAESCKEAHHSALNPQSWLQVERGKLPRLSSQSSSASIESLIKVPQSPILPFFKPVDYVEVLAQIHEELESCPPQEQSNLFLLQYQVFKGLGDVKLMRRSLRSAWQRANTVHEKIIFGAWLKYEKQGEELVAQLLTACGKCEKEFGPIDVESHIPFDKNVSSQDRALMNGNDASEYVIFKIGDEKIVCDRQKISELSAPFHAMLKGCFRESLSETIDLSENNLSPSGMRAVSYFSLTDSLLDVPPNLLVEILAFANKYCCEGLKQACDRRLASLVSSREDALELMEYAVDQNSAVLAASCLQVLLRNIPKCLSDNRVVELFIHANKQQLAVMVGPGIFSLFCFLSEVSMNLNSSSDTTAHFLERLVDFAENDKQRLLAFHQLGCVRLSRKEYDEAYCLFERALNVGHIYSVAGLARLDSIKGEKLLSYEKISSVISSVTPLGWMYQERSLYCDGDLRRKDLEKATELDPTLIYPYMYRTASLMKSGNVQVALAEINRILGFKLSLECLELRFFIYLVLEDYKAALRDVQAILSLCPSYKMFEGRVAASQLCTLVREHVEHWTTADCWVRLYDCWSAVDDIESLSVIYQMLESDVAKGVLYFRQSLLLLRLNCPEAAMRSLQLAWQHVSSEHERLVYEGWILYDTGHCEEGLQKAEESISIKRSFEAYFLKAYALADSSLDSSCSSTVISLLEDALRCPSDNLRKGQALNNLGSVYVDCGKLELAEDCYIKALKIQHTRAHQGLARVHFLKNDKAAAYKEMTNLIEKARNNASAYEKRSEYGDREITKADLEMVTRLDPLRVYPYRYRAAVLMDSHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSVDPFHQKMLELHCRVNSHEP* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0256 887 Gene3D Potassium Channel Kv1.1; Chain A 172 320 IPR011333 -
Gso10g0256 887 PANTHER ETO1-RELATED 1 887 IPR044631 GO:0010105
Gso10g0256 887 Gene3D Tetratricopeptide repeat domain 600 772 IPR011990 GO:0005515
Gso10g0256 887 SUPERFAMILY TPR-like 604 838 IPR011990 GO:0005515
Gso10g0256 887 SUPERFAMILY TPR-like 382 629 IPR011990 GO:0005515
Gso10g0256 887 SUPERFAMILY POZ domain 182 276 IPR011333 -
Gso10g0256 887 Coils Coil 755 782 - -
Gso10g0256 887 Gene3D Tetratricopeptide repeat domain 784 884 IPR011990 GO:0005515
Gso10g0256 887 Gene3D Tetratricopeptide repeat domain 360 547 IPR011990 GO:0005515
Gso10g0256 887 ProSiteProfiles TPR repeat profile. 710 743 IPR019734 GO:0005515
Gso10g0256 887 SMART BTB_4 180 280 IPR000210 GO:0005515
Gso10g0256 887 PANTHER ETO1-LIKE PROTEIN 1 1 887 - -
Gso10g0256 887 SMART tpr_5 839 872 IPR019734 GO:0005515
Gso10g0256 887 SMART tpr_5 381 414 IPR019734 GO:0005515
Gso10g0256 887 SMART tpr_5 510 543 IPR019734 GO:0005515
Gso10g0256 887 SMART tpr_5 710 743 IPR019734 GO:0005515
Gso10g0256 887 Pfam Tetratricopeptide repeat 711 739 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0256 Gso-Chr10 2645394 2650093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0256 - - gmx:100782033 1726.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1196 2 14932295 14937356 Gso10g0256 10 2645394 2650093 GST
Gso19g1323 19 41931547 41938484 Gso10g0256 10 2645394 2650093 PCT
Gso3g1323 3 39112329 39119218 Gso10g0256 10 2645394 2650093 PCT
Gso10g0256 10 2645394 2650093 Gso19g1323 19 41931547 41938484 PCT
Gso10g0256 10 2645394 2650093 Gso3g1323 3 39112329 39119218 PCT