Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1317 ATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTCTTGGCCAAAATCATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGATTTTCACGCAGATGATGTTCTCTCCCAAGGTGTTGATGAAGAGTGTAGCAGCAACTACTCAGAAAGGGAGGCATGCACCATCAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCGGACAGAATGCGAAGAGGTAAGAATGACCTTGATGAAGCTCAGGTTACAGATGTGTATAACTATAGAATCTTTGCTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAACCTTGAAGATTGGCTTCACACATCTCCACCCGCTGATATCTATGTTCTTGGATTTCAAGAAATTGTACCTCTTAATGCTGGTAATGTTTTGGGGACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATTAGAAGGACCCTGAACAGCCTTCCTGGAACAAGTGGCGGATGCCACACTCCTTCACCCCTCCCTAATCCTATTGTAGAGCTAGATGCTGATTTTGAAGGATCAATGAGGCAGAAGGCAACTTCTTTCTTTCAACGAAGATCCTTCCAATCCTTGAGCCGTAGTATGAGAATCGATAATGATATGATAAAGCCCCAAGCTTGCCTTGAGCGCCGTCTCAGTGTCTGTGATAGAGTGATGTTTGGTCACAGAACGAGCGACTACGACCCCAATTATCGGTGGGGTTCCTCAGACGAAGAAAACGGCACTGGTGGCTCTCCAATTACAACACAATATTCACCAATGTCATATGGCGGTTGTTTCACTACGGAGGACAGTGATAGACAGACAGGACACTCTAGATACAGCTTGGTTGCTAGCAAGCAAATGGTTGGGGTATTTCTAACTGTTTGGGTGAAGAGTGATATAAGAGATGATGTCCACAACATGAAAGTGTCTTGTGTTGGCAGAGGGTTGATGGGCTATCTTGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACATCTGGACAAAAGGATGGTGATGAGTTACGGAGAAATTCAGATGTAATGGAAATTCTCAGAAAGACAAGGTTTCCCCCGGTCCATGACATCGGTGATGAGTATTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTGTTAGAGAATGATCAGTTGTGTATAGAGCAGAGGCAAGGTCGAGTCTTTGAAGGATGGAATGAAGGGAAAATATATTTTCCTCCGACTTATAAGTATTCAAACAATTCAGACAGATATGCAGGTGATGACAGACGCTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGGGGCCTTCACCAATTATCATATGTTCGTGGGGAGTCAAGGTTTTCTGATCATCGGCCAGTGTATAGCATGTTCTTGGCAGAGGTTGAGTCTGTTAGCTGTAACCAAATAAAGAAAAGCGCCAGTTCCAGGATTGAAGTAGTAGAGTTGTTTCCACATTCACATTGTTACAGCTACACTGATATGAACTACTTTTGA 1674 0.4307 MRDENSKKSKLSWPKSLVKKWFNIKSKAEDFHADDVLSQGVDEECSSNYSEREACTIRKSKSERSSRWYSDRMRRGKNDLDEAQVTDVYNYRIFAATWNVAGKSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNSLPGTSGGCHTPSPLPNPIVELDADFEGSMRQKATSFFQRRSFQSLSRSMRIDNDMIKPQACLERRLSVCDRVMFGHRTSDYDPNYRWGSSDEENGTGGSPITTQYSPMSYGGCFTTEDSDRQTGHSRYSLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPPVHDIGDEYSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWKTLLENDQLCIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSMFLAEVESVSCNQIKKSASSRIEVVELFPHSHCYSYTDMNYF* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1317 557 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 556 - -
Gso3g1317 557 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 556 IPR045849 GO:0004445|GO:0046855
Gso3g1317 557 Gene3D Endonuclease/exonuclease/phosphatase 67 549 IPR036691 -
Gso3g1317 557 SUPERFAMILY DNase I-like 81 532 IPR036691 -
Gso3g1317 557 Pfam Endonuclease/Exonuclease/phosphatase family 96 510 IPR005135 GO:0003824
Gso3g1317 557 SMART i5p_5 193 525 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1317 Gso-Chr3 39008441 39013404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1317 124 490 Acyl Lipid Metabolism Gene Families AT2G43900 26.515 7.85e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1317 - - gmx:100803074 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1315 19 41835892 41840923 Gso3g1317 3 39008441 39013404 GST
Gso3g1317 3 39008441 39013404 Gso2g1205 2 15039831 15044834 PCT
Gso3g1317 3 39008441 39013404 Gso10g0248 10 2546127 2551265 PCT
Gso2g1205 2 15039831 15044834 Gso3g1317 3 39008441 39013404 PCT
Gso10g0248 10 2546127 2551265 Gso3g1317 3 39008441 39013404 PCT