Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1205 ATGGGAGATGAGAACTCGAAGAAAAGCAAGCTTTCATGGCCCAAAACGTTGGTCATGAAGTGGTTCAATATTAAGAGCAAAAATGAGGACTTTCAGGCAGATGATGTCCTCTACGCAGGTGTCAATGAAGAGTGGAGGAACAACTGTTCACAGAGGGATGAAGACGCTATCAAGAGAACCAAAACAGAGAGAGCAAAGAAGAGACACTCAGATAGAATGCGGCGAGGTAAAATTGACCGTGATGCAGCTCAGGTTACAGATGTGCATAACTATAGAATCTTTGCTGCCACTTGGAATGTAGCTGGAAAATCTCCTCCAAGTTATTTGAGTCTGGAAGATTGGCTTCACTCTTCTGCTCCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTCAATGCGGGTAATATTTTGGGCACAGAAGACAATGGCCCTGCCAGAAAGTGGCTAGCTCTTATTAGGAAGACCCTGAATAGTCTTCCTGGAACAAGCGGGGAATGCCACACTACTTCACCGCTTCCTGACCCTATTGTAGAGTTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGACGACCTCTTTCTTACATCGCCGATCGTTCCAATCCTTGAGTCATAGTATGAGAATGGACAATGAGATGTCACTACCCCAAGCATGCCTTGATCGTCGTCTCAGTGTCTGTGATAGAATGATGTTTGGTCACAGGACAAGTGATTATGACCCCAGTTATAGATGGGCTTCCTCGGACGATGAAAACGGCCCTAGCGACTCCCCAGTCGTAACACATTATTCACCAATGACATATAGATGTTGTTTCTCTATGGAGGATAGAGATAGACAGACAGGGAAGTCAAGATACTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATATTTCTAACAGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCTCAATATGAAAGTGTCTTGTGTTGGCAGAGGATTAATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCTGGACAAAAGGAAGGTGATGAGCTAAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCGGGTTCAAGGCATGGGTGATGAGAGTTCTCCTCAGACAATTCTGGATCATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAGGCTCTTGTTGAGATGCATAATTGGAAGGTTCTGTTGGAGAATGACCAGCTACATATAGAGCGGAGACAAGGTCGGGTCTTTGAAGGATGGAATGAAGGGAAAATATATTTCCCTCCCACATACAAGTATTCAAACAATTCAGATAGATATGCAGGTGATGAGAGACAGTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGAGGCCTCCGCCAATTATCATATGTTCGTGGGGAGTCAAGATTCTCGGATCATAGACCAGTTTATAGCATGTTTCTGGCAGAAGTTGAGTCTATTAGCCGTAACCGAATAAAGAAATGCTCTAGTTGCTCCAGTTCAAGGATTGAAGTAGAAGAGTTGTTGCCTCATTCACACGGTTACAGTTACACTGATCTGAGTTTCTTCTGA 1683 0.4296 MGDENSKKSKLSWPKTLVMKWFNIKSKNEDFQADDVLYAGVNEEWRNNCSQRDEDAIKRTKTERAKKRHSDRMRRGKIDRDAAQVTDVHNYRIFAATWNVAGKSPPSYLSLEDWLHSSAPADIYVLGFQEIVPLNAGNILGTEDNGPARKWLALIRKTLNSLPGTSGECHTTSPLPDPIVELDADFEGSMRQKTTSFLHRRSFQSLSHSMRMDNEMSLPQACLDRRLSVCDRMMFGHRTSDYDPSYRWASSDDENGPSDSPVVTHYSPMTYRCCFSMEDRDRQTGKSRYCLVASKQMVGIFLTVWVKSDIRDDVLNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVQGMGDESSPQTILDHDRIIWLGDLNYRIALSYRAAKALVEMHNWKVLLENDQLHIERRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERQSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVYSMFLAEVESISRNRIKKCSSCSSSRIEVEELLPHSHGYSYTDLSFF* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1205 560 SMART i5p_5 225 525 IPR000300 GO:0016791|GO:0046856
Gso2g1205 560 Pfam Endonuclease/Exonuclease/phosphatase family 96 510 IPR005135 GO:0003824
Gso2g1205 560 Gene3D Endonuclease/exonuclease/phosphatase 225 545 IPR036691 -
Gso2g1205 560 Gene3D Endonuclease/exonuclease/phosphatase 69 184 IPR036691 -
Gso2g1205 560 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 556 IPR045849 GO:0004445|GO:0046855
Gso2g1205 560 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 556 - -
Gso2g1205 560 SUPERFAMILY DNase I-like 78 534 IPR036691 -
Gso2g1205 560 MobiDBLite consensus disorder prediction 56 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1205 Gso-Chr2 15039831 15044834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1205 286 490 Acyl Lipid Metabolism Gene Families AT1G05630 29.694 4.46e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1205 - - gmx:100788764 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1205 2 15039831 15044834 Gso2g1205 2 15039831 15044834 ECH
Gso2g1205 2 15039831 15044834 Gso10g0248 10 2546127 2551265 GST
Gso19g1315 19 41835892 41840923 Gso2g1205 2 15039831 15044834 PCT
Gso3g1317 3 39008441 39013404 Gso2g1205 2 15039831 15044834 PCT
Gso2g1205 2 15039831 15044834 Gso19g1315 19 41835892 41840923 PCT
Gso2g1205 2 15039831 15044834 Gso3g1317 3 39008441 39013404 PCT