Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1315 ATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTCTTGGTCAAAATCATTGGTCAAGAAGTGGTTCAATATCAAGAACAAAGCTGAGGATTTTCACTCAGATGAGGTTCTCTCCCAAGGTGTTGATGAAGAGTGTAGCAGCAACTATTCAGAAAGGGAGGCATGCACCATCAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCAGACAGAATGCGAAGAGGAAGAGGGAAGTCACCTCCATGTTATTTGAGTCTTGAAGACTGGCTTCACACATCTCCACCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCGGGTAATGTTTTGGGAACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATTAGGAGGACCCTGAACAGCCTTCCTGGAACAAATGGCGGATGCCACACTCCTTCGCCCCTCCCTAATCCTATTGTAGAGCTAGATGCCGATTTTGAGGGATCAATGAGGCAGAAGGCAACTTCTTTCTTTCAACGAAGATCCTTCCAATCCTTGAGTCGTAGTATGAGAATCGATAATGATATGCTAATGCCCCAAGCCTGCCTTGATCGCCGTCTCAGTGTCTGTGATAGAGTGATGTTTGGTCACAGAACGAGCGACTATGATCCCAATTATCGATGGGGTTCCTCAGATGAAGAAAATGGCACTGGTGACTCCCCAATTACAGCACAATATTCACCAATGTCATATGGCGGTTGTTTCTCTACAGAAGACAGTGATAGACACACAGGACACTCAAGATATTGCTTGGTTGCTAGTAAGCAAATGGTTGGGGTATTTCTAACTGTTTGGGTGAAGAGTGATATAAGAGATGATGTTCACAACATGAAAGTGTCTTGTGTTGGCAGAGGCTTGATGGGATATCTTGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGACGAGTTACGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCCTGTCCTAGACATCGGTGGTGAGTATTCTCCTCAGACAATTCTGGAACATGACCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCATTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTGTTAGAGAATGACCAGTTGTGTATAGAGCAGAGGCAAGGTCGAGTCTTTGAAGGATGGAATGAAGGGAAAATATATTTCCCTCCCACTTATAAGTATTCAAACAATTCAGACAGATATGCAGGTGATGACAGACACTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGGGGCCTTCACCAATTATCATACGTTCGTGGGGAGTCAAGATTTTCTGATCATCGGCCAGTGTATAGCATGTTCTTGGCAGAGGTTGAGTCTGTTAGCTGTAACCAAATAAAGAAAAGCTCCAGTTCCAGGATTGAAGTAGAAGAGTTGTTTCCACATTCACATGGCAATACAGTGAGTGAGCAATTGCCAGCCACAATGATGATCGAGACATTCTGTTATCCTCACTTTCAAACAAGCTGCAGAGTTTGTGGTCTTGCACTATGGATATTTGCGGCTCACAGCCTTATTGGTAGAATAATGGCTATGTGGATCAAAGAAAATATACAGCATTTATTCTCAATTCTCATGAATGAGAGGATTTGA 1770 0.426 MRDENSKKSKLSWSKSLVKKWFNIKNKAEDFHSDEVLSQGVDEECSSNYSEREACTIRKSKSERSSRWYSDRMRRGRGKSPPCYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNSLPGTNGGCHTPSPLPNPIVELDADFEGSMRQKATSFFQRRSFQSLSRSMRIDNDMLMPQACLDRRLSVCDRVMFGHRTSDYDPNYRWGSSDEENGTGDSPITAQYSPMSYGGCFSTEDSDRHTGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPPVLDIGGEYSPQTILEHDRIIWLGDLNYRIAISYRAAKALVEMHDWKTLLENDQLCIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDDRHSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSMFLAEVESVSCNQIKKSSSSRIEVEELFPHSHGNTVSEQLPATMMIETFCYPHFQTSCRVCGLALWIFAAHSLIGRIMAMWIKENIQHLFSILMNERI* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1315 589 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 77 IPR045849 GO:0004445|GO:0046855
Gso19g1315 589 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 78 526 IPR045849 GO:0004445|GO:0046855
Gso19g1315 589 SUPERFAMILY DNase I-like 87 507 IPR036691 -
Gso19g1315 589 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 77 - -
Gso19g1315 589 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 78 526 - -
Gso19g1315 589 SMART i5p_5 169 501 IPR000300 GO:0016791|GO:0046856
Gso19g1315 589 Gene3D Endonuclease/exonuclease/phosphatase 75 188 IPR036691 -
Gso19g1315 589 Gene3D Endonuclease/exonuclease/phosphatase 246 519 IPR036691 -
Gso19g1315 589 Pfam Endonuclease/Exonuclease/phosphatase family 84 486 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1315 Gso-Chr19 41835892 41840923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1315 100 466 Acyl Lipid Metabolism Gene Families AT2G43900 26.263 1.68e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1315 - - gmx:100790043 1196.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1315 19 41835892 41840923 Gso3g1317 3 39008441 39013404 GST
Gso19g1315 19 41835892 41840923 Gso2g1205 2 15039831 15044834 PCT
Gso19g1315 19 41835892 41840923 Gso10g0248 10 2546127 2551265 PCT
Gso2g1205 2 15039831 15044834 Gso19g1315 19 41835892 41840923 PCT
Gso10g0248 10 2546127 2551265 Gso19g1315 19 41835892 41840923 PCT