Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0248 ATGAGAGATGACAACTCGAAGAAAAGCAAGCTTTCATGGCCCAAAACGTTGGTCAAGAAGTGGTTCAACATTAAAAGCAAAAACGAGGACTTTCAGGCAGATGATGTCCTCTACGCAGGTGTCAATCAAGAGTGGAGGAACTGTTCACAGAGGGAGGAAGACACTATCAAGAGAAGCAAAACAGAGAGAGCAAAGAGGAGACACTCAGATAGAATGCGGCGAGGTAGAATTGACCGTGATGCAGCTCCGGTTACAGATGTGCATAACTATAGAATCTTTGCTGCCACTTGGAATGTAGCTGGAAAATCACCTCCAAGTTATTTGAGTCTGGAAGATTGGCTTCACTCTTCTCCTCCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTCAATGCTGGCAATGTTTTGGGCACAGAAGATAATGGCCCTGCCAGAAAGTGGCTATCTCTTATTAGGAAGACCCTAAACAGTCTTCCTGGAACAAGCGGTGAATGCCACACTACTTCACCGCTCCCTGACCCTATTGTAGAGTTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGACGACCTCTTTCTTCCATCGCCGGTCATTCCAATCCTTGAGTCATAGTATGAGAATGGACAATGACATGTCACTACCACAAGCATGCCTTGATCGTCGTCTCAGTGTATGTGATAGAATGATGTTTGGTCACAGGCCAAGTGACTATGACCCCTGTTATAGATGGGCTTCCTCGGATGATGAAAATGGCCCTGGTGACTCCCCAGTTGTAACACATTATTCACCAATGATATATAGAGGTTGCTTCTCTATGGAGGATAGATTTAGACAGACAGGACAGTCAAGATACTGTTTGGTTGCTAGTAAGCAAATGGTTGGAATATTTCTAACAGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAATATGAAAGTGTCTTGTGTTGGCAGAGGATTAATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCTGGACAAAAGGAAGGTGATGAACTAAGGAGGAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCGAGTTCAAGACATGGGAGATGAGAGTTCTCCTCAGACAATTCTGGATCATGATCGAATAATTTGGCTGGGGGATTTAAATTACCGGATAGCCCTTTCTTACCGTGCAGCAAAGGCTCTTGTTGAGATGCATAATTGGAAGGTTCTGTTGGAGAATGACCAGCTACATATAGAGCGGAGACAAGGTCGAGTCTTTGAAGGATGGAATGAGGGGAAAATATATTTCCCTCCCACATACAAGTATTCAAACAATTCAGATAGATATGCAGGCGATGAAAGACAGTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGAGGCCTCCGCCAATTATCGTACGTTCGTGGGGAGTCAAGATTCTCAGATCATAGACCAGTTTATAGCATGTTTCTGGCAGAAGTTGAGTCTGTTAGCCGTAACCGAATCAAAAAATGCTCTAGCTGCTCCAGTTCAAGGATTGAAGTGGAAGAGTTGTTGCCTCATTCACACGGTTACAGTTACACTGATTTGAGTTTCTTCTGA 1680 0.4304 MRDDNSKKSKLSWPKTLVKKWFNIKSKNEDFQADDVLYAGVNQEWRNCSQREEDTIKRSKTERAKRRHSDRMRRGRIDRDAAPVTDVHNYRIFAATWNVAGKSPPSYLSLEDWLHSSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLSLIRKTLNSLPGTSGECHTTSPLPDPIVELDADFEGSMRQKTTSFFHRRSFQSLSHSMRMDNDMSLPQACLDRRLSVCDRMMFGHRPSDYDPCYRWASSDDENGPGDSPVVTHYSPMIYRGCFSMEDRFRQTGQSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVQDMGDESSPQTILDHDRIIWLGDLNYRIALSYRAAKALVEMHNWKVLLENDQLHIERRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERQSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVYSMFLAEVESVSRNRIKKCSSCSSSRIEVEELLPHSHGYSYTDLSFF* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0248 559 Gene3D Endonuclease/exonuclease/phosphatase 263 544 IPR036691 -
Gso10g0248 559 Gene3D Endonuclease/exonuclease/phosphatase 69 195 IPR036691 -
Gso10g0248 559 SMART i5p_5 224 524 IPR000300 GO:0016791|GO:0046856
Gso10g0248 559 MobiDBLite consensus disorder prediction 49 73 - -
Gso10g0248 559 SUPERFAMILY DNase I-like 75 533 IPR036691 -
Gso10g0248 559 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 555 IPR045849 GO:0004445|GO:0046855
Gso10g0248 559 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 555 - -
Gso10g0248 559 Pfam Endonuclease/Exonuclease/phosphatase family 95 509 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0248 Gso-Chr10 2546127 2551265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0248 291 489 Acyl Lipid Metabolism Gene Families AT1G05630 30.045 3.03e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0248 - - gmx:100797409 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1205 2 15039831 15044834 Gso10g0248 10 2546127 2551265 GST
Gso19g1315 19 41835892 41840923 Gso10g0248 10 2546127 2551265 PCT
Gso3g1317 3 39008441 39013404 Gso10g0248 10 2546127 2551265 PCT
Gso10g0248 10 2546127 2551265 Gso19g1315 19 41835892 41840923 PCT
Gso10g0248 10 2546127 2551265 Gso3g1317 3 39008441 39013404 PCT