Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1299 ATGGAGCTTAGCAAATTGACGTTAGAGATCTTCTCAAAATTGGAGCAGCAATGGCTCTCGCACTACGAAGCATCAACCAAAACGCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGCTTCCCTCGTCCACCTCGAGGACCAGATCCGCGCCCAAACCTCCGATCCTCACGCGCAAATCACTGATTACTTTGACATCATCGCCGGCACCGGCATTGGCGCCATCCTCGCCGTCATGATCACCGCCGACGACGGCTTCGGCCGGCCTCTGTACACCGTCAGAGACGCCGTCAACTTCCTCGCCGAAAACAACCGCGAACTCTACAAGCCGAAACGCGCCGGCGTGTTCCGCCGACGCCGTAGATTCTCCGCGAGGAGCATGGAAAACACGCTAAAGCGCGTTTTCAAGAGAAAAGAGGGAGAAGAACGGTTGTTGACTCTGAAGGACACGTGTAAGCCGCTACTTGTCCCTTGCTTTGACCTCAAGAGCTCTGCGCCGTTCGTGTTCTCCCGAGCCGACGCGTCCGAGTCACCGAGTTTCAACTTCGAGCTTTGGAAGGCGTGCCGCGCCACGTCAGCGACTCCTGGCGTTTTCGCGCCCTTTCACTTCTCCTCCGTCGACGGAAAAACCTCGTGCGCCGCCGTCGACGGCGGCTTAGTGATGAACAATCCGGCCGCGGCGGCGGTCACGCACGTCCTCCACAACAAGCGCGACTTCCCGTCGGTGAACGGCGTGGAGGATCTCCTTGTTCTCTCCATCGGAAACGGAGCTCCGGCGAAGAGAATGAACAATGCCGGCGAGTGCTCTACGTCAATGCTGATTGACATTGCGCTCGACGGTGTTTCAGAGACCGTTGACCAGATGCTAGGGAACGCCTTCTGTTGGAATCGTACCGACTATGTCAGGATTCAGGCTATCGGATTAGGAGATCAAGGAAAAGATGATGAGAAGGTACTGAACGAGAGAGTCCTTGAATCGTTACCGTTTGGGGGAAAACGGTTACTGCAGGAGACAAACGGTAACAGAATTGAGAGCTTCGTGCAACGTCTTGTTGCTACTGGGAAGACAAGTCTTCCACCTAGTCCGTGCAAGCTTCCGCCGTAA 1119 0.5621 MELSKLTLEIFSKLEQQWLSHYEASTKTRILSIDGGGTTAIVAGASLVHLEDQIRAQTSDPHAQITDYFDIIAGTGIGAILAVMITADDGFGRPLYTVRDAVNFLAENNRELYKPKRAGVFRRRRRFSARSMENTLKRVFKRKEGEERLLTLKDTCKPLLVPCFDLKSSAPFVFSRADASESPSFNFELWKACRATSATPGVFAPFHFSSVDGKTSCAAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAPAKRMNNAGECSTSMLIDIALDGVSETVDQMLGNAFCWNRTDYVRIQAIGLGDQGKDDEKVLNERVLESLPFGGKRLLQETNGNRIESFVQRLVATGKTSLPPSPCKLPP* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1299 372 Pfam Patatin-like phospholipase 31 233 IPR002641 GO:0006629
Gso3g1299 372 CDD Pat17_PNPLA8_PNPLA9_like 30 321 - -
Gso3g1299 372 Gene3D Cytosolic phospholipase A2 catalytic domain 18 363 - -
Gso3g1299 372 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 234 IPR002641 GO:0006629
Gso3g1299 372 SUPERFAMILY FabD/lysophospholipase-like 27 315 IPR016035 -
Gso3g1299 372 PANTHER PATATIN 2 372 - -
Gso3g1299 372 PANTHER PATATIN-LIKE PROTEIN 6 2 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1299 Gso-Chr3 38785315 38786879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1299 1 369 Acyl Lipid Metabolism Gene Families AT3G63200 69.067 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1299 - - gmx:100806989 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1302 19 41644008 41645577 Gso3g1299 3 38785315 38786879 GST
Gso3g1299 3 38785315 38786879 Gso2g1219 2 15188690 15190327 PCT
Gso3g1299 3 38785315 38786879 Gso10g0233 10 2423613 2425284 PCT
Gso2g1219 2 15188690 15190327 Gso3g1299 3 38785315 38786879 PCT
Gso10g0233 10 2423613 2425284 Gso3g1299 3 38785315 38786879 PCT