Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0233 ATGGAGTTTAGTAACCTCACTCTGGAGATCTTCTCCAAACTGGAGCAAAAATGGCTCTCACATTGTAAAGCCACCAACAAAACTCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGAAGCTCTCATCTACCTCGAGGATCAGATCCGTGTTCACACCTCCGATCCTCACGCTCAGGTAGCCGATTTCTTCGACATCGTCGCCGGCACCGGCATTGGCGCCATCCTTGCCGCCATGATCACCGCCGGCGACACCTTTGGTAGGCCGCTCTACACCGCCAGGGAAGCCGTCCGTCTCGTCTCGGAAAGAAACTCTGAACTCTACAAGCTCAAATCCGGCGGAATCTTCCGCCGGCGCCGGAGATTCTCCTCCAGGAGCATGGACAACGCGTTGAAGCAAGTGTTCCAGAGAAAGGAGGAGGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGCTCCTTATTCCTTGCTTCGACCTCAAGAGTTCCGCGCCGTTCGTGTTTTCGCGCGCCGACGCGTCCGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGCCGTGCCACGTCAGCGACGCCGAGCCACTTCAAGCCGTTCGACTTCGCTTCCGTCGACGGCAAGACCTCGTGCTCCGCCGTCGACGGCGGCCTAGTCATGAACAACCCTACTGCGGCGGCCGTCACGCACGTCCTCCATAACAAGCGCGATTTCCCGTCGGTGAACGGCGTGGAGGATCTGCTCGTCCTTTCCTTGGGGAACGGATCGTCGAACGCAAAAGCGTGCGAGACTCGCACGTGCTCAACGCCGTCGGTGGTTGACATTGTGCTCGACGGTGTTTCCGAGACCATTGACCAGATGTTAGGGAACGCCTTCTGCTGGAACCGTACGGACTACGTCAGAATCCAGGCTTTCGGTTTGGAAAGTGAAGCAATGAAGAAGGAAGAGGTTCTCAAAGAGAGGGGACTCGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTCACAGAGACTAACGGAAACAGAATAGATAGCTTCGTGCGACGTCTTGTTGCTACCGGAAAACCAAGCCCGCCGTCAAGTCCCTGCAAGGATTCCGCCGTCAACCCTCTCGCTAACGGTCGCTAG 1143 0.5713 MEFSNLTLEIFSKLEQKWLSHCKATNKTRILSIDGGGTTAIVAGEALIYLEDQIRVHTSDPHAQVADFFDIVAGTGIGAILAAMITAGDTFGRPLYTAREAVRLVSERNSELYKLKSGGIFRRRRRFSSRSMDNALKQVFQRKEEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFDFASVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSSNAKACETRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLESEAMKKEEVLKERGLESLPFGGKRLLTETNGNRIDSFVRRLVATGKPSPPSSPCKDSAVNPLANGR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0233 380 Pfam Patatin-like phospholipase 31 233 IPR002641 GO:0006629
Gso10g0233 380 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 234 IPR002641 GO:0006629
Gso10g0233 380 PANTHER PATATIN-LIKE PROTEIN 6 1 380 - -
Gso10g0233 380 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 380 - -
Gso10g0233 380 MobiDBLite consensus disorder prediction 358 380 - -
Gso10g0233 380 Gene3D Cytosolic phospholipase A2 catalytic domain 17 361 - -
Gso10g0233 380 CDD Pat17_PNPLA8_PNPLA9_like 30 332 - -
Gso10g0233 380 SUPERFAMILY FabD/lysophospholipase-like 26 315 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0233 Gso-Chr10 2423613 2425284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0233 1 380 Acyl Lipid Metabolism Gene Families AT3G63200 70.207 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0233 - - gmx:100777557 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1219 2 15188690 15190327 Gso10g0233 10 2423613 2425284 GST
Gso19g1302 19 41644008 41645577 Gso10g0233 10 2423613 2425284 PCT
Gso3g1299 3 38785315 38786879 Gso10g0233 10 2423613 2425284 PCT
Gso10g0233 10 2423613 2425284 Gso19g1302 19 41644008 41645577 PCT
Gso10g0233 10 2423613 2425284 Gso3g1299 3 38785315 38786879 PCT