Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1219 ATGGAGTTTAGTAAAGTCACTCTGGAGATCTTCTCCAAACTGGAGCACAAATGGCTCTCTCATTGTAAAGCTACCAACAAAACCCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGAAGCTCTCATCTACCTCGAGGATCAGATCCGTCTCCACACCTCCGATCCTCACGCTCAGGTAGCCGATTTCTTCGACATCGTCGCCGGCACCGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGCGACGCCTTCGGCAGGCCGCTCTACACCGCCAGGGAAGCCGTCCGTCTCGTTTCGGAGAGAAACTCCGAACTCTACAAGCTGAAATCCGGCGGAATCTTCCGCCGGCGCCGGAGATTCTCCTCCAGTAGCATGGACAACGCGTTGAAGCAAGTGTTCCGGAGAAAGGAGGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGGTCCTTATTCCTTGCTTCGACCTCAAGAGTTCCGCGCCGTTCGTGTTTTCGCGCGCCGACGCGTCCGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGCCGAGCCACGTCAGCGACGCCGAGCCACTTCAAGCCATTCGACTTAGCTTCCGTCGACGGCAAGACCTCCTGCTCCGCCGTGGACGGCGGCCTTGTGATGAACAACCCTACGGCGGCGGCCGTCACGCACGTCCTCCACAACAAGCGCGATTTCCCGTTGGTTAACGGCGTGGAGGATCTCCTGGTCCTCTCCTTGGGGAACGGATCGTCGAACGCAAAAGCGTGCGAGAGTCGCACGTGCTCAACGCCGTCGGTGGTTGACATTGTACTCGACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAATGCCTTCTGCTGGAACCGTACGAACTACGTCAGAATCCAGGCGTTCGGCTTGGGAAATGAAGCAATGAAGAAGGAAGAGTTTCTCCAAGAGAGGGGACTCGAATCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAATGGAAACAGAATAGATAGCTTCGTGCAACGTCTTGTTGCTACCGGAAAACCAAGCCCGCCGTCAAGTCCCTGCAAGGATTCCGCCGTCAACCCTCTCGCTAATGGCCGCTAG 1140 0.5737 MEFSKVTLEIFSKLEHKWLSHCKATNKTRILSIDGGGTTAIVAGEALIYLEDQIRLHTSDPHAQVADFFDIVAGTGIGAILAAMITAGDAFGRPLYTAREAVRLVSERNSELYKLKSGGIFRRRRRFSSSSMDNALKQVFRRKEDGRLLTLKDTCKPVLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFDLASVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPLVNGVEDLLVLSLGNGSSNAKACESRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTNYVRIQAFGLGNEAMKKEEFLQERGLESLPFGGKRLLTETNGNRIDSFVQRLVATGKPSPPSSPCKDSAVNPLANGR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1219 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Gso2g1219 379 MobiDBLite consensus disorder prediction 357 379 - -
Gso2g1219 379 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
Gso2g1219 379 SUPERFAMILY FabD/lysophospholipase-like 26 321 IPR016035 -
Gso2g1219 379 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Gso2g1219 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Gso2g1219 379 PANTHER PATATIN-LIKE PROTEIN 6 1 379 - -
Gso2g1219 379 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1219 Gso-Chr2 15188690 15190327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1219 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 70.130 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1219 - - gmx:100795441 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1219 2 15188690 15190327 Gso2g1219 2 15188690 15190327 ECH
Gso2g1219 2 15188690 15190327 Gso10g0233 10 2423613 2425284 GST
Gso19g1302 19 41644008 41645577 Gso2g1219 2 15188690 15190327 PCT
Gso3g1299 3 38785315 38786879 Gso2g1219 2 15188690 15190327 PCT
Gso2g1219 2 15188690 15190327 Gso19g1302 19 41644008 41645577 PCT
Gso2g1219 2 15188690 15190327 Gso3g1299 3 38785315 38786879 PCT