Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0166 ATGGCCGGTTCAGAACCTGTTAGGGCAGAGGGAGAGACTATGGCTGTGGATGCTGCCCCAAGGAAGCCCCGGATTCTACTTGCTGCGAGTGGGAGTGTTGCTGCTGTCAAATTTGCAAATCTTTGTCACTGTTTCTCTGAATGGGCAGATGTAAGAGCAGTTTCCACAAGTGCATCTTTGCATTTCATTGATAGAGCAGCAATGCCCAAGGATGTAATTCTATACACGGATGACAATGAATGGTCTAGTTGGAAGAAATTAGGTGATAGCGTGCTTCACATTGAGCTTCGCAAATGGGCTGATATCATGGTCATCGCTCCATTATCAGCAAACACCCTTGGCAAGATTGCTGGAGGGTTGTGTGACAATCTACTGACATGCATCGTTCGAGCCTGGGACTACAGCAAGCCATTCTTTGTTGCACCAGCCATGAACACTTTTATGTGGAACAATCCTTTCACAGAGCGGCATCTCATCTCCATTGATGAGCTTGGCATTTCTCTCATCCCGCCTGTTACAAAGAGGTTAGCTTGTGGGGACTATGGCAATGGTGCCATGGCTGAACCCTCTACCATTTACTCAACTGTAAGGCTCTTCTATGAGTCTAAGGCTCAGCAAGGTAATGGTGATATCTGA 636 0.4701 MAGSEPVRAEGETMAVDAAPRKPRILLAASGSVAAVKFANLCHCFSEWADVRAVSTSASLHFIDRAAMPKDVILYTDDNEWSSWKKLGDSVLHIELRKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFVAPAMNTFMWNNPFTERHLISIDELGISLIPPVTKRLACGDYGNGAMAEPSTIYSTVRLFYESKAQQGNGDI* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0166 211 Pfam Flavoprotein 24 197 IPR003382 GO:0003824
Gso3g0166 211 Gene3D - 22 210 IPR036551 GO:0003824
Gso3g0166 211 PANTHER BNAA01G27100D PROTEIN 12 203 - -
Gso3g0166 211 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 12 203 - -
Gso3g0166 211 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 22 199 IPR036551 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0166 Gso-Chr3 2129453 2132593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0166 K01598 - gmx:100499989 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0711 7 7722976 7726676 Gso3g0166 3 2129453 2132593 GST
Gso18g2046 18 53299146 53300845 Gso3g0166 3 2129453 2132593 PCT
Gso9g2199 9 46339781 46341036 Gso3g0166 3 2129453 2132593 PCT
Gso3g0166 3 2129453 2132593 Gso18g2048 18 53357843 53360714 PCT
Gso3g0166 3 2129453 2132593 Gso9g2200 9 46348993 46350460 PCT