Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2048 ATGGATTGCTCTGATCCAGCAAGTAAAAAGGCAAAAGCTGAGGCAGGGTGTGCTATTACAAGGAAGCCTCGGATTCTACTTGGTGCTTGTGGAAGTGTTGGTGCTGTGAAATTTGGGCATGTTTGTCGTTGTTTTGCAGAATGGGCAGAAGTAAGGGCGGTGGTCACAAAATCATCCTTGTGTTTTATTGATGAACAAACATTTCCCAAGGATGTTGTTGTATTTTGTGATAAGCATGAGTGGCTTACATGGAAAAAGCTAGGTGATCCTGTGATGCATATTGAGCTTCTTAGATGGGCTGAAATAATGGTCATTGCTCCATTGTCAGCAAATACTCTTGGCAAGATAGCTGGAGGGTTGTGTGACAATCTTCTGACATGTATTGTGAGAGCATGGGACTACAGCAAGCCACTGTTTGTTGCACCATCCATGAACTCTATTGTATGGAGAAACCCTTTCACCGAACGGCATTGCACCGAGATTGATGAGCTTGGCATCACTCTCATCCCTCCTGTTACACATACAACAGCTAGTGGGGATTTTGAGCATGGCGCAATGGCTGAACCTTCAACCATTTCCTCGACTGTGAGAGTTTTTTATGTGTTAAAGATGCAGAAAAAGTAG 624 0.4375 MDCSDPASKKAKAEAGCAITRKPRILLGACGSVGAVKFGHVCRCFAEWAEVRAVVTKSSLCFIDEQTFPKDVVVFCDKHEWLTWKKLGDPVMHIELLRWAEIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPLFVAPSMNSIVWRNPFTERHCTEIDELGITLIPPVTHTTASGDFEHGAMAEPSTISSTVRVFYVLKMQKK* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2048 207 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 22 198 IPR036551 GO:0003824
Gso18g2048 207 Pfam Flavoprotein 24 196 IPR003382 GO:0003824
Gso18g2048 207 Gene3D - 22 206 IPR036551 GO:0003824
Gso18g2048 207 PANTHER BNAA01G27100D PROTEIN 20 200 - -
Gso18g2048 207 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 20 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2048 Gso-Chr18 53357843 53360714 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2048 K01598 - gmx:100782568 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2048 18 53357843 53360714 Gso9g2200 9 46348993 46350460 GST
Gso7g0711 7 7722976 7726676 Gso18g2048 18 53357843 53360714 PCT
Gso3g0166 3 2129453 2132593 Gso18g2048 18 53357843 53360714 PCT