Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2199 ATGGATTGCTCAGAGGCAGGGTGTGCTATTCCAACGAAGCCTCGGATTCTACTTGCTGCTTGTGGAACTTATGATGCTTGTAAATTTAAGGTTGTTCATTGGAAATTCGCCGAATGGGCAGCTGAAATAAAGGTGGTTATCACAAAATCAGCTTTGCGTTATCATGGAACTCCCAGGAATGAACTTGCATCTGTTGATGAGAATGATTGGCTTACTTACAGAAGGCCAGGTGTTGCTATGCTTCACGTTGAGCTTCGTAATTGGGCTGATATCATGGTCATCGCTCCATTGTCAACAAATACTCTTGGCAAGATTGCTTTAGGGTTGTGTGATAATCTTCTGACAAGCATTGTGCGAGCATGGGACTACAGGAAGCCACTTTTTGTTGCACCATCCATGAGCACTTGTATATGGGAAGACTTTTTCACAGAACGACATTTAAATGCAATTGATGAGCTTGGCATCATTCTCATCCGACCTGTATCTATTACAACAGCTAGTGGGGAACGTGAGCATGCAATGGCTGAGCCTTCCACCATTTGCTCAGATGTGAAAGCCTCTTATTATAAGCAAATGCAAAAGATGATGCAGAAAGAGGCTAGTACTACTAGTACTAGCTAG 621 0.43 MDCSEAGCAIPTKPRILLAACGTYDACKFKVVHWKFAEWAAEIKVVITKSALRYHGTPRNELASVDENDWLTYRRPGVAMLHVELRNWADIMVIAPLSTNTLGKIALGLCDNLLTSIVRAWDYRKPLFVAPSMSTCIWEDFFTERHLNAIDELGIILIRPVSITTASGEREHAMAEPSTICSDVKASYYKQMQKMMQKEASTTSTS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2199 206 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 12 184 IPR036551 GO:0003824
Gso9g2199 206 Pfam Flavoprotein 15 184 IPR003382 GO:0003824
Gso9g2199 206 PANTHER BNAA01G27100D PROTEIN 10 186 - -
Gso9g2199 206 Gene3D - 6 196 IPR036551 GO:0003824
Gso9g2199 206 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 10 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2199 Gso-Chr9 46339781 46341036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2199 K01598 - gmx:100811599 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2046 18 53299146 53300845 Gso9g2199 9 46339781 46341036 GST
Gso9g2199 9 46339781 46341036 Gso7g0711 7 7722976 7726676 PCT
Gso9g2199 9 46339781 46341036 Gso3g0166 3 2129453 2132593 PCT