Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2200 ATGGATTCGTCTGGTCCTGCAAGGGAAAAGGGCAAGGCAAAAGCTGTGGCAAGAAGAACTAGGGCAAGAGCTAAGGCTAAAGCTAAGGCTAAAGCTAAGGCAAAAGATAATACAAAAGCTAATACAAAAGCTAAGGCAGAAGCTAATACAGAAGCTAAGGCAAAAACTAATACAGAAGCTAAGGAAAAAACTAATACAGAAGCTAAGGCAGAGTGTGCTCCTCCTCCAGAGAAGCCTCGGGTTCTGCTTGCTTGTTGTGGAAGTATTTGTGCAGCAAAATTTGAGCGTGTTTGTAGACATTTTTTAGAATGGGCAGAAGTGAAGGTAGTTCTCACAAGATCAGCTTTGCCTTATATTGGAGATCAAACATTTCCCGATGATCTACTTGCATGTATTGATGAGCACGAGTGGCTTACTTGGAAACAGATAGGTGATCCTGTGGTCCACATTGAGCTTCGTGAATGGGCTGATATCATGGTCATTGCTCCATTGTCATTAAACACTCTTGGCAAGATAGCGGGAGGGTTGTGTGACAATCTTCTGACATGCATTGTGAGAGCATGGGACTACGAGAAGCCATTTTTTGTTGCACCATCCATGGAGTCTTCTGAGTGGATAGACTCATTAACTGAAGATCATGCGATGGCCATTGATGAGCTTGGCATCCATCTCATCCCACCTGTTCCTCAGAGGGCATCTGAGTATCACGCAATGGCACAACCTTTCACCATTTACTCAAGTGTGAGAGCTTCTTATGAGTTAAAGATGAAAGGAAAGTATGGTCAGGTTTAG 792 0.4343 MDSSGPAREKGKAKAVARRTRARAKAKAKAKAKAKDNTKANTKAKAEANTEAKAKTNTEAKEKTNTEAKAECAPPPEKPRVLLACCGSICAAKFERVCRHFLEWAEVKVVLTRSALPYIGDQTFPDDLLACIDEHEWLTWKQIGDPVVHIELREWADIMVIAPLSLNTLGKIAGGLCDNLLTCIVRAWDYEKPFFVAPSMESSEWIDSLTEDHAMAIDELGIHLIPPVPQRASEYHAMAQPFTIYSSVRASYELKMKGKYGQV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2200 263 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 77 238 IPR036551 GO:0003824
Gso9g2200 263 MobiDBLite consensus disorder prediction 14 30 - -
Gso9g2200 263 PANTHER BNAA01G27100D PROTEIN 74 253 - -
Gso9g2200 263 MobiDBLite consensus disorder prediction 1 75 - -
Gso9g2200 263 Pfam Flavoprotein 80 248 IPR003382 GO:0003824
Gso9g2200 263 MobiDBLite consensus disorder prediction 31 68 - -
Gso9g2200 263 Gene3D - 78 261 IPR036551 GO:0003824
Gso9g2200 263 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 74 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2200 Gso-Chr9 46348993 46350460 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2200 K01598 - gmx:100800183 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2048 18 53357843 53360714 Gso9g2200 9 46348993 46350460 GST
Gso7g0711 7 7722976 7726676 Gso9g2200 9 46348993 46350460 PCT
Gso3g0166 3 2129453 2132593 Gso9g2200 9 46348993 46350460 PCT