Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2186 ATGGGCACCGTCACCTACAGCTACAAAATGTTCAAGTACTTCAACAGAAAATTCGACGTCTCCGAGCAGGCCCCTCCGCCGGACGTCAAGGAGGCCTTCTCCGCCTTCTCCCACGGCGCCGCCTCCTCCATGTCCGCCCACCAGCTCCTCCGCTTCCTGCACGACCACCAGCGTGAAACCGACTGCACCGCAGAGGATTCCAACCGCATCCTCGACAGCATCATTCAATCGCGCAAACAAACCAACGACACCAACTCCGAACGCCACCACCACCCCGACAACAACAAGAATGGGCTCACCCTCGACGAGTTCTTCCGTTTCTTGTTCCTTCTCGATTTCAACGATCCCCTCAAATCCCAGGTACATCATGATATGAATGCTCCGTTGTCACATTATTTCATATATACAGGGCACAATTCCTACCTGACTGGGAATCAGCTGAGCAGCGTTTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGGGTAATTGAACTAGATTTATGGCCAAATTCAACTAAAGATGATATTGACGTAGTTCATGGAAGGACACTTACTGCTCCTGTCTCACTTATCCAATGTTTAAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTAACTACCCGGTCATCATAACTTTAGAGGACCACCTTACACCATTTCTTCAAGCTAGAGTGGCAGAGATGATAGCTCAAGTATTTGGAGATATGCTCTATTTTCCTCATGAAGATCCTCTGACAGAATTCCCCTCGCCGGAGTCGTTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAATCCAAACAATTCAAGGATAGTGACAGTGAGAGGGAATCAAATGAAGAAGGATCATTATCCCCATGCATTATCCCTGAATTGGAGGTTGTTGATGAGAAGTCAAATGGAAATGATCTTGATGAGGAAGGCTTGAGTGCTCGTGATAAAAAATCAGACCAACAGAGTGCACCAGAGTACAAACGTTTGATTACAATCAATGCTGGGAAGCCAAAGGGTCATGTAAAGGACCACTTGAACAATGTTGGGGGCGTAAAGCGCTTGAGCTTGAGCGAACACGAACTTGAAAAGGCTTCTGCTACTTATGGATCTGATATTGTTAGATTTACACAGAAGAATATTATCAGGGTGTATCCAAAGGGAACACGTGTTACCTCCTCAAATTACAGGCCACATATAGGATGGATGTACGGAGCTCAGATGGTGGCATTTAACATGCAGGGGCATGGAAAATCACTCTGGTACATGCAAGGCATGTTTAGAGCAAATGGCGGGTGTGGTTATGTGAAAAAGCCTGCATTTCTGACAGAAAAAGGTCCGCATAATGAGGTTGTTGATCCTAAAAGAGCATTGCCAGAGAAGAAGTCATTGAAGGTAAAAGTATATATGGGAAACGGGTGGAGCTCAGATTTCAGCAAAACACACTTTGATACATTCTCTCCACCGGACTTTTACACAAAGGTTTGCATTGTTGGAGTACCAGCTGATAAAGCCAATAAGAAGACCAAGGTAATTCAAGATAATTGGTTTCCCGTCTGGGACGAAGAGTTTGAATTTCCCTTGACTGTTCCTGAACTAGCTTTGCTTCGAATAGAAGTTCGAGAGTATGATAAGCATGAAAAGGATGACTTTGGTGGACAAACATGTTTACCCGTCTCTGAGCTAAGATCTGGATTCCGTGCCGTCCCACTTTTTGATCAGAAGGGCGAGCAATTAAAATCTGTAAAGCTTTTAATGCGGTTTCAGTTTGTTGATAGTGTACCAACTAGTCAATAG 1815 0.4452 MGTVTYSYKMFKYFNRKFDVSEQAPPPDVKEAFSAFSHGAASSMSAHQLLRFLHDHQRETDCTAEDSNRILDSIIQSRKQTNDTNSERHHHPDNNKNGLTLDEFFRFLFLLDFNDPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSVCSDVPIIKALQRGVRVIELDLWPNSTKDDIDVVHGRTLTAPVSLIQCLKSIKEYAFVKSNYPVIITLEDHLTPFLQARVAEMIAQVFGDMLYFPHEDPLTEFPSPESLKGRILISTKPPKEYLESKQFKDSDSERESNEEGSLSPCIIPELEVVDEKSNGNDLDEEGLSARDKKSDQQSAPEYKRLITINAGKPKGHVKDHLNNVGGVKRLSLSEHELEKASATYGSDIVRFTQKNIIRVYPKGTRVTSSNYRPHIGWMYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPAFLTEKGPHNEVVDPKRALPEKKSLKVKVYMGNGWSSDFSKTHFDTFSPPDFYTKVCIVGVPADKANKKTKVIQDNWFPVWDEEFEFPLTVPELALLRIEVREYDKHEKDDFGGQTCLPVSELRSGFRAVPLFDQKGEQLKSVKLLMRFQFVDSVPTSQ* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2186 604 Gene3D Phosphatidylinositol (PI) phosphodiesterase 120 460 IPR017946 GO:0006629|GO:0008081
Gso2g2186 604 SMART C2_3c 469 577 IPR000008 -
Gso2g2186 604 SMART plcx_3 123 267 IPR000909 -
Gso2g2186 604 MobiDBLite consensus disorder prediction 273 289 - -
Gso2g2186 604 MobiDBLite consensus disorder prediction 273 293 - -
Gso2g2186 604 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 362 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso2g2186 604 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 597 IPR001192 GO:0035556
Gso2g2186 604 SUPERFAMILY EF-hand 11 125 IPR011992 -
Gso2g2186 604 ProSiteProfiles C2 domain profile. 450 579 IPR000008 -
Gso2g2186 604 PRINTS Phospholipase C signature 128 146 IPR001192 GO:0035556
Gso2g2186 604 PRINTS Phospholipase C signature 154 174 IPR001192 GO:0035556
Gso2g2186 604 PRINTS Phospholipase C signature 251 268 IPR001192 GO:0035556
Gso2g2186 604 PRINTS Phospholipase C signature 387 408 IPR001192 GO:0035556
Gso2g2186 604 PRINTS Phospholipase C signature 408 426 IPR001192 GO:0035556
Gso2g2186 604 PRINTS Phospholipase C signature 563 573 IPR001192 GO:0035556
Gso2g2186 604 SMART plcy_3 333 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso2g2186 604 MobiDBLite consensus disorder prediction 308 330 - -
Gso2g2186 604 Pfam Phosphatidylinositol-specific phospholipase C, X domain 125 267 IPR000909 -
Gso2g2186 604 Gene3D - 24 116 - -
Gso2g2186 604 Gene3D C2 domain 465 604 IPR035892 -
Gso2g2186 604 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 361 447 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso2g2186 604 SUPERFAMILY PLC-like phosphodiesterases 123 450 IPR017946 GO:0006629|GO:0008081
Gso2g2186 604 CDD C2_PLC_like 467 596 - -
Gso2g2186 604 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 597 IPR035892 -
Gso2g2186 604 Pfam C2 domain 470 571 IPR000008 -
Gso2g2186 604 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 6 597 - -
Gso2g2186 604 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 123 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2186 Gso-Chr2 46532514 46537384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2186 5 596 Acyl Lipid Metabolism Gene Families AT2G40116 59.706 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2186 K05857 - gmx:100777010 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0503 14 4822643 4827824 Gso2g2186 2 46532514 46537384 GST
Gso18g0242 18 2105213 2110743 Gso2g2186 2 46532514 46537384 PCT
Gso13g1377 13 29284387 29290626 Gso2g2186 2 46532514 46537384 PCT
Gso2g2186 2 46532514 46537384 Gso18g0242 18 2105213 2110743 PCT
Gso2g2186 2 46532514 46537384 Gso13g1377 13 29284387 29290626 PCT