Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0242 ATGGCCAGCCATAACTACAAAGTCTTCAGCTGCTTCAACAGGAAGTTCACCGTCACCGAGCCGGGCCCACCGCCGGACGTCCAAAAAGCGTTTTCTGAATTTGCCGACGGAGCCTCCTCCCTGTCCGGCGATCAGCTCCTCCGATTTCTGGCGAAGCACCAGGGCGAAGTGGACTGCACCGCAGTGGATTCGGAGCGGATCCTCCAGCAATCGCGGAAAGAGGATCGGGAAAGTGGACTGGATCTCCACGACTTCTTCCGTTTCCTGCTACATGACGATTTCAATAGCCCCATCAAATCTCAGGTACATCATGATATGACTGCTCCATTGTCACATTATTTCATTTATACTGGGCACAATTCCTATCTTACCGGGAATCAACTGAGCAGTGACTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGAGAGTAATTGAACTAGATTTATGGCCAAATTCAGACGAAGATGATATCGAAGTAGTTCATGGAAGGACTCTTACCACTCCTGTCTCACTCATCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTCATTACCCACTCATTATAACTTTAGAAGATCACCTTACTCCAGATCTTCAAGCTAAAGCTGCAGAGATGGCAACTCAAGTATTTGGAGAATTGCTTTATTATCCTCAGACAGATTCTCTGATGGAATTCCCCTCACCGGAATCATTGAAAGGCCGAATTCTTATATCAACCAAACCACCAAAAGAATTTCTTGAATCCAAAGAATATGATGACAAGGACAATGAAAAGGAATCAGCTGACGAGCTTTCATCATTGCCAGATCAAACTAGTGAACAGGAAACTGATGATAAGAGTGCACCTGAGTACAAACACTTGATTACAATCCATGCTGGGAAACCAAAGGGTGATATACAGGATGAATTAAAAGCTGCTGGAGCAGTTAGGCGCTTAAGCTTAAGTGAACAAGCACTTGAAAAGGCTTCTGAATCTTATGGAGCTGATATTGTTAGGTTTACACAGAACAATATTCTCAGAGTATATCCAAAGGGAACACGTCTCAATTCCTCAAATTACAAGCCACACATAGGGTGGACGTATGGAGCTCAGATGGTTGCGTTTAACATGCAGGGGTATGGCAAATCACTTTGGTACATGCAAGGAATGTTTAGAGCAAATGGACGGTGCGGTTATGTGAAAAAACCTGAATTTCTTATTGAGAAAGGTCCACATAATGAGGTTTTTGATCCTAGAAGAACATTGCCTGTGAAGAAAACATTAAAGGTAAAAGTCTATATGGGGACTGGTTGGAGCTTAGATTTCAGCCAAACAGACTTTGATACTTACTCGCCACCAGATTTTTATGTTAAGGTTTGTATTGTTGGAGTTCCTGCTGATATGGCCAAGAAGAAAACAAGTGTAATTTCAAATAACTGGTTTCCTGTTTGGGATGAAGAGTTTGATTTCCCTTTGACTGTTCCAGAACTGGCTTTGCTCCGCATAGAAGTTCGAGAGAATGATAAGAGTCAGAAGGATGACTTTGGTGGACAGACATGTTTGCCTGTCTCAGAGCTAAAATCTGGATTCCGATCAGTCCCTCTCCATGATGAAAAGGGTGACAAATTAAAATCTGTGAAGCTTTTGATGTGGTTTCAGTTTAGATGA 1671 0.4267 MASHNYKVFSCFNRKFTVTEPGPPPDVQKAFSEFADGASSLSGDQLLRFLAKHQGEVDCTAVDSERILQQSRKEDRESGLDLHDFFRFLLHDDFNSPIKSQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSDEDDIEVVHGRTLTTPVSLIQCLKSIKEYAFVKSHYPLIITLEDHLTPDLQAKAAEMATQVFGELLYYPQTDSLMEFPSPESLKGRILISTKPPKEFLESKEYDDKDNEKESADELSSLPDQTSEQETDDKSAPEYKHLITIHAGKPKGDIQDELKAAGAVRRLSLSEQALEKASESYGADIVRFTQNNILRVYPKGTRLNSSNYKPHIGWTYGAQMVAFNMQGYGKSLWYMQGMFRANGRCGYVKKPEFLIEKGPHNEVFDPRRTLPVKKTLKVKVYMGTGWSLDFSQTDFDTYSPPDFYVKVCIVGVPADMAKKKTSVISNNWFPVWDEEFDFPLTVPELALLRIEVRENDKSQKDDFGGQTCLPVSELKSGFRSVPLHDEKGDKLKSVKLLMWFQFR* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0242 556 Pfam Phosphatidylinositol-specific phospholipase C, X domain 106 248 IPR000909 -
Gso18g0242 556 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 555 IPR001192 GO:0035556
Gso18g0242 556 Gene3D - 23 100 - -
Gso18g0242 556 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 321 407 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso18g0242 556 SMART C2_3c 428 536 IPR000008 -
Gso18g0242 556 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 104 248 - -
Gso18g0242 556 CDD C2_PLC_like 426 556 - -
Gso18g0242 556 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 428 555 IPR035892 -
Gso18g0242 556 ProSiteProfiles C2 domain profile. 409 538 IPR000008 -
Gso18g0242 556 SMART plcy_3 292 408 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso18g0242 556 MobiDBLite consensus disorder prediction 254 272 - -
Gso18g0242 556 SMART plcx_3 104 248 IPR000909 -
Gso18g0242 556 MobiDBLite consensus disorder prediction 254 291 - -
Gso18g0242 556 CDD PI-PLCc_plant 103 395 - -
Gso18g0242 556 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 318 406 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso18g0242 556 SUPERFAMILY EF-hand 6 106 IPR011992 -
Gso18g0242 556 Pfam C2 domain 429 530 IPR000008 -
Gso18g0242 556 PRINTS Phospholipase C signature 109 127 IPR001192 GO:0035556
Gso18g0242 556 PRINTS Phospholipase C signature 135 155 IPR001192 GO:0035556
Gso18g0242 556 PRINTS Phospholipase C signature 232 249 IPR001192 GO:0035556
Gso18g0242 556 PRINTS Phospholipase C signature 346 367 IPR001192 GO:0035556
Gso18g0242 556 PRINTS Phospholipase C signature 367 385 IPR001192 GO:0035556
Gso18g0242 556 PRINTS Phospholipase C signature 522 532 IPR001192 GO:0035556
Gso18g0242 556 Gene3D C2 domain 423 556 IPR035892 -
Gso18g0242 556 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 2 555 - -
Gso18g0242 556 Gene3D Phosphatidylinositol (PI) phosphodiesterase 101 421 IPR017946 GO:0006629|GO:0008081
Gso18g0242 556 SUPERFAMILY PLC-like phosphodiesterases 104 409 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0242 Gso-Chr18 2105213 2110743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0242 2 555 Acyl Lipid Metabolism Gene Families AT2G40116 61.730 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0242 K05857 - gmx:100786997 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0242 18 2105213 2110743 Gso18g0242 18 2105213 2110743 ECH
Gso18g0242 18 2105213 2110743 Gso13g1377 13 29284387 29290626 GST
Gso18g0242 18 2105213 2110743 Gso14g0503 14 4822643 4827824 PCT
Gso18g0242 18 2105213 2110743 Gso2g2186 2 46532514 46537384 PCT
Gso14g0503 14 4822643 4827824 Gso18g0242 18 2105213 2110743 PCT
Gso2g2186 2 46532514 46537384 Gso18g0242 18 2105213 2110743 PCT