Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0503 ATGGGCACCGTCACCTACAGCTACAAAATGTTCAAGTACTTCAATAGAAAATTCGCCGTCTCCGAGCAGGCCCCTCCGCCGGACGTCAAGGAGGCCTTCTCCGCCTTCTCCGACGCCGCTGCCGCATCCATGTCCGCCGACCAGCTCCTCCGCTTCCTGCACGATCACCAGCGCGAAACGGACTGCTCCGCTGAGGATTCCAACCGCATCCTCGACAGCATCATTCAATCGCGCAAACAAAACGACACCAATGCCGAATGCGACCACCACACCGACAACAACAACAATGGTCTCAGCCTCGACGAGTTCTTCCGTTTCTTGTTCCTCGTCGATTTCAACGATCCCCTCAAATCCCAGGTACATCATGATATGAATGCTCCGTTGTCACATTATTTCATATATACAGGGCACAATTCCTACCTGACTGGGAATCAGCTGAGCAGCGATTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTAAAGATGATATCGACGTAGTTCATGGAAGGACACTTACTGCTCCTGTCTCACTTATCCAATGTTTAAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTGACTACCCAGTCATCATAACTTTAGAGGACCACCTTACACCATTCCTTCAAGCTAAAGTTGCAGAGATGATAGCTCAAGTATTTGGAGACATGCTCTATTTTCCTCAGGCAGATTCTCTGACAGAATTCCCCACACCAGAATCGTTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAATCCAAGCAATTCAAGGATAGTGACAGTGAGAGGGAATCAACTGAAGAAGGATCATTATCCCCATGTGTTATCCCTGAATTGGAGGCTGTTGATGAGAAGTTAAATGGAAGTGATCTTGATGAGGAAGGCTTGAATGCTCGTGATAAAAAATCAGACCAACAGAGTGCACCTGAGTACAAACGTTTGATTACAATCCATGCTGGGAAGCCAAAGGGTCATGTAAAGCACCACTTGAACAATGTTGGGGGCGTGAAGCGCTTGAGCTTGAGCGAACAGGAACTTGAAAAGGCTTCTGCTACTTATGGATCAGATATTGTTAGATTTACACAGAAGAATATTATCAGGGTGTATCCAAAGGGAACACGTGTTACCTCCTCGAATTACAGGCCACATATAGGATGGATGTATGGAGCTCAGATGGTGGCATTTAACATGCAGGGGCATGGAAAATCACTCTGGTACATGCAAGGCATGTTTAGAGCAAATGGCGGGTGTGGTTATGTGAAAAAGCCTGCATTTCTAATAGAAAAAGGTCCACATAATGAGGTTTTTGATCCTAAAAGAGCATTGCCAGTGAAGAAAACATTGAAGGTGAAAGTATATATGGGAAATGGGTGGAGCTCAGATTTCAGCAAAACGCACTTTGATTCCTTCTCTCCACCGGACTTTTACACAAAGGTTTGCATTGTTGGAGTACCAGCTGATAAAGCCAATAAGAAGACCAAGGTAATTCAAGACAACTGGTTTCCCGTCTGGGACGAAGAGTTTGAATTTCCCTTGACTGTTCCAGAACTAGCTTTGCTCCGAATAGAAGTTCGAGAATATGATAAGCATGAAAAGGATGACTTTGGTGGGCAAACATGTTTGCCAATCTCTGAGTTAAGATCTGGTTTCCGTGCAGTCCCTCTATTTGATCAGAAGGGCGAGCAATTAAAATCTGTAAAGCTTTTAATGCGGTTTCAGTTCAAATGA 1791 0.4433 MGTVTYSYKMFKYFNRKFAVSEQAPPPDVKEAFSAFSDAAAASMSADQLLRFLHDHQRETDCSAEDSNRILDSIIQSRKQNDTNAECDHHTDNNNNGLSLDEFFRFLFLVDFNDPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTKDDIDVVHGRTLTAPVSLIQCLKSIKEYAFVKSDYPVIITLEDHLTPFLQAKVAEMIAQVFGDMLYFPQADSLTEFPTPESLKGRILISTKPPKEYLESKQFKDSDSERESTEEGSLSPCVIPELEAVDEKLNGSDLDEEGLNARDKKSDQQSAPEYKRLITIHAGKPKGHVKHHLNNVGGVKRLSLSEQELEKASATYGSDIVRFTQKNIIRVYPKGTRVTSSNYRPHIGWMYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPAFLIEKGPHNEVFDPKRALPVKKTLKVKVYMGNGWSSDFSKTHFDSFSPPDFYTKVCIVGVPADKANKKTKVIQDNWFPVWDEEFEFPLTVPELALLRIEVREYDKHEKDDFGGQTCLPISELRSGFRAVPLFDQKGEQLKSVKLLMRFQFK* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0503 596 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 360 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso14g0503 596 Pfam Phosphatidylinositol-specific phospholipase C, X domain 124 266 IPR000909 -
Gso14g0503 596 MobiDBLite consensus disorder prediction 272 295 - -
Gso14g0503 596 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 595 IPR001192 GO:0035556
Gso14g0503 596 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 122 266 - -
Gso14g0503 596 Gene3D Phosphatidylinositol (PI) phosphodiesterase 119 460 IPR017946 GO:0006629|GO:0008081
Gso14g0503 596 CDD PI-PLCc_plant 121 435 - -
Gso14g0503 596 CDD C2_PLC_like 466 596 - -
Gso14g0503 596 SUPERFAMILY PLC-like phosphodiesterases 122 449 IPR017946 GO:0006629|GO:0008081
Gso14g0503 596 ProSiteProfiles C2 domain profile. 449 578 IPR000008 -
Gso14g0503 596 SMART C2_3c 468 576 IPR000008 -
Gso14g0503 596 PRINTS Phospholipase C signature 127 145 IPR001192 GO:0035556
Gso14g0503 596 PRINTS Phospholipase C signature 153 173 IPR001192 GO:0035556
Gso14g0503 596 PRINTS Phospholipase C signature 250 267 IPR001192 GO:0035556
Gso14g0503 596 PRINTS Phospholipase C signature 386 407 IPR001192 GO:0035556
Gso14g0503 596 PRINTS Phospholipase C signature 407 425 IPR001192 GO:0035556
Gso14g0503 596 PRINTS Phospholipase C signature 562 572 IPR001192 GO:0035556
Gso14g0503 596 Gene3D - 23 115 - -
Gso14g0503 596 SMART plcx_3 122 266 IPR000909 -
Gso14g0503 596 Pfam C2 domain 468 570 IPR000008 -
Gso14g0503 596 Gene3D C2 domain 463 596 IPR035892 -
Gso14g0503 596 SMART plcy_3 332 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso14g0503 596 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 361 447 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso14g0503 596 MobiDBLite consensus disorder prediction 309 329 - -
Gso14g0503 596 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 468 595 IPR035892 -
Gso14g0503 596 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 6 595 - -
Gso14g0503 596 SUPERFAMILY EF-hand 9 124 IPR011992 -
Gso14g0503 596 MobiDBLite consensus disorder prediction 272 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0503 Gso-Chr14 4822643 4827824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0503 5 596 Acyl Lipid Metabolism Gene Families AT2G40116 60.522 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0503 K05857 - gmx:547863 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0503 14 4822643 4827824 Gso2g2186 2 46532514 46537384 GST
Gso18g0242 18 2105213 2110743 Gso14g0503 14 4822643 4827824 PCT
Gso13g1377 13 29284387 29290626 Gso14g0503 14 4822643 4827824 PCT
Gso14g0503 14 4822643 4827824 Gso18g0242 18 2105213 2110743 PCT
Gso14g0503 14 4822643 4827824 Gso13g1377 13 29284387 29290626 PCT