Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2185 ATGGGAAACAACATAGCAACATACAACAAATACAAAAGTTTATTGTTCTTTATCAGAAAGTACAAGTTCACCGAGCTGCTTCTGCGTGCCACCGAACTGCTTCCACCGCAGGACCTCAAGGAGGCGTTTTCAAAGTTCACTGGAGGAGGGTCCTACATGTCCGCGGAGCAGCTCCACGGTTTCCTGATGGAGCATCAGGGGCAAGTGAGAAAGACATGTCAAGAAACTGTTAATAAGGTTGATCAAAATAGAGAACATGAGATCACCCTTGATGAGCTCTTCCGTTTTTTGCTTCATGATGATTCCAACGCTCCCTTGAAAGCCGAGGTACATCATGATATGGGTGCTCCATTGTCACATTATTTCATATATACAGGCCATAACTCCTATTTGACAGGGAATCAACTCAGCAGTGACTGCAGTGAAGAACCAATCATAAAGGCTTTGAAAAGAGGCGTGCGTGTTATTGAACTTGATTTATGGCCAACTTACAATAAGCATGATATTAAAGTAGATCATGGATGGACTCTTGCCAACCCTGCCTCAGTTATTATATGTCTAGAATCCATAAAGGAATATGGTTTTGTTGCATCTCAATACCCAGTGATCATAACTATAGAAGACCATCTTACAACAGATCTTCGAGCTAAATTTGCAGAAATGGCAACTCAAATATTTGGGGAAATGCTTTTTTACCCTGGGGCAGATTGCTCTTGCTTAACAGAATTCCCTTCCCCGGAATCACTAAAAAATCGAGTTATTATATCAACGAAACCCCCGAAAGAACGTTTTAAGTCCTACCGTATCAAGGACAATCCTATGCTAAATGAAAGTGAATCATCTGAAGAAGAATCATGGGAAAATGAATCTCCAGACTCCAATAAGAACGAAGTGGAGACCGAGGACATGAATGGAAGTGATCATGATGAGGGAAATGAAAGTGCATGTGAATGTGCCCGCAAACCATATCAGGTGTGTTCACCTGATTACAAACACATAATCACTATCCATAATACGAAACTCAAGGGTTGCCTGAAGGATAAATTGAAAACAGACGGTGAAGTTAGACGCCTAAGTTGGAGTGAGAAGACCCTTGAAAAGGCTTCAGAATCTCATGGAACAGATATTCTTAGGTTCACACAGAAAAATATCCTCAGGGTTTACCCGAGTGCAATGCGTGTCAAATCCTCAAATTTCAAGCCAAATATTGGGTGGATGTACGGGGCTCAAATGGTTGCATGCAATATGCAGGGGCTTGGCAAATCGCTCTGGTTGATGCAGGGTATGTTCAGGGCAAATGGAGGCTGTGGTTATGTAAAGAAGCCTCAATTTCTAATGCAGAAGTATCACTGTGACAATGAGTTTGATCCTACAAGGATACAGTCAGTGAAGAAGAAGACATTTAAGGTAAAAGTATACATGGGACATGGGTGGAGCTCAGATTTGAGTCCTACACACTTTGATAAGTGCTCTCCGCCAGACTTCTACACTAAGGTTTGTATTGTTGGAATGCCAGATGATGTTGCAAAGAAGAAAACAAAGGTTATGATGGACAATTGGTTTCCTGTTTGGGATGAAGAATTTGAATTCTCTTTAATTGTTCCAGAGCTTGCATTGCTTCTCATACAAGTAAAGGACAAAGATCCTGGAAAGGATGATTTTGCTGGACAGACATGTTTGCCAGTTTCGGAGCTAAAACATGGATTTCATTCAGTCCCTTTATATAACAAAAAGGGAGAGAAATTTAAATCTGTAAAGCCATTGATGCAGTTTCAGTTTGAATGA 1785 0.4095 MGNNIATYNKYKSLLFFIRKYKFTELLLRATELLPPQDLKEAFSKFTGGGSYMSAEQLHGFLMEHQGQVRKTCQETVNKVDQNREHEITLDELFRFLLHDDSNAPLKAEVHHDMGAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALKRGVRVIELDLWPTYNKHDIKVDHGWTLANPASVIICLESIKEYGFVASQYPVIITIEDHLTTDLRAKFAEMATQIFGEMLFYPGADCSCLTEFPSPESLKNRVIISTKPPKERFKSYRIKDNPMLNESESSEEESWENESPDSNKNEVETEDMNGSDHDEGNESACECARKPYQVCSPDYKHIITIHNTKLKGCLKDKLKTDGEVRRLSWSEKTLEKASESHGTDILRFTQKNILRVYPSAMRVKSSNFKPNIGWMYGAQMVACNMQGLGKSLWLMQGMFRANGGCGYVKKPQFLMQKYHCDNEFDPTRIQSVKKKTFKVKVYMGHGWSSDLSPTHFDKCSPPDFYTKVCIVGMPDDVAKKKTKVMMDNWFPVWDEEFEFSLIVPELALLLIQVKDKDPGKDDFAGQTCLPVSELKHGFHSVPLYNKKGEKFKSVKPLMQFQFE* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2185 594 SMART plcx_3 112 258 IPR000909 -
Gso2g2185 594 Gene3D C2 domain 460 594 IPR035892 -
Gso2g2185 594 PRINTS Phospholipase C signature 117 135 IPR001192 GO:0035556
Gso2g2185 594 PRINTS Phospholipase C signature 143 163 IPR001192 GO:0035556
Gso2g2185 594 PRINTS Phospholipase C signature 242 259 IPR001192 GO:0035556
Gso2g2185 594 PRINTS Phospholipase C signature 384 405 IPR001192 GO:0035556
Gso2g2185 594 PRINTS Phospholipase C signature 405 423 IPR001192 GO:0035556
Gso2g2185 594 PRINTS Phospholipase C signature 560 570 IPR001192 GO:0035556
Gso2g2185 594 MobiDBLite consensus disorder prediction 266 314 - -
Gso2g2185 594 SUPERFAMILY PLC-like phosphodiesterases 116 458 IPR017946 GO:0006629|GO:0008081
Gso2g2185 594 SUPERFAMILY EF-hand 23 114 IPR011992 -
Gso2g2185 594 Gene3D Phosphatidylinositol (PI) phosphodiesterase 109 459 IPR017946 GO:0006629|GO:0008081
Gso2g2185 594 Pfam C2 domain 470 568 IPR000008 -
Gso2g2185 594 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 594 IPR001192 GO:0035556
Gso2g2185 594 CDD C2_PLC_like 482 594 - -
Gso2g2185 594 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 354 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso2g2185 594 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 359 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso2g2185 594 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Gso2g2185 594 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 594 - -
Gso2g2185 594 Pfam Phosphatidylinositol-specific phospholipase C, X domain 114 258 IPR000909 -
Gso2g2185 594 SMART plcy_3 330 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso2g2185 594 SMART C2_3c 467 574 IPR000008 -
Gso2g2185 594 ProSiteProfiles C2 domain profile. 449 576 IPR000008 -
Gso2g2185 594 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 112 258 - -
Gso2g2185 594 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 467 592 IPR035892 -
Gso2g2185 594 MobiDBLite consensus disorder prediction 288 314 - -
Gso2g2185 594 Gene3D - 31 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2185 Gso-Chr2 46524883 46528931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2185 3 594 Acyl Lipid Metabolism Gene Families AT2G40116 53.035 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2185 K05857 - gmx:100776483 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0504 14 4831850 4836268 Gso2g2185 2 46524883 46528931 GST
Gso18g0243 18 2111863 2116399 Gso2g2185 2 46524883 46528931 PCT
Gso13g1376 13 29277845 29282341 Gso2g2185 2 46524883 46528931 PCT
Gso2g2185 2 46524883 46528931 Gso18g0243 18 2111863 2116399 PCT
Gso2g2185 2 46524883 46528931 Gso13g1376 13 29277845 29282341 PCT