Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0504 ATGGGAAATAACATGGCAACATACAACAAATACAAAAGTTTCTTGTTCTTTATCAGAAAGTTCAAGGTCACCGAGCCAGTTTCACCTCAGGACCTTGAGGAGGCGTTTTCAAAGTTCACCGGAGGAGGTTCCCACATGTCTGCGGACGAGCTCCACCGTTTCCTGGTGGAGCACCAGGGTGAAGAAGACTACACGTTATTGGATTCGGAGAAAGTTGTTGAGAAGGTTCTGAAAGAGAGAAAGAGATGTCAAGAAAGTGTTAAGGTTGATCAAAATAGAGAACATGAGATCACCCTTGATGAGCTCTTCCGTTTTTTGCTTCATGATGATTCCAACGGTCCCTTGAAAGCCGAGGTACATCATGATATGGGTGCTCCATTGTCACATTATTTCATATATACAGGCCATAACTCCTATTTGACGGGGAATCAGCTCAGCAGTGACTGCAGTGAAGAACCAATCATAAAGGCTTTGAAAAGAGGCGTGCGTGTTATTGAACTTGATTTATGGCCAACATACAATAAGCATGATATTAAAGTAGATCATGGATGGACTCTCACAAACCCTGCTTCAGTTATCAAATGTCTAGAGTCCATAAAGGAATATGGTTTTGTTGCATCTCAATACCCGGTGATCATAACTATAGAAGACCATCTTACAACAGATCTTCGAGCTAAATTTGCAGAAATGGCAACTCAAATATTTGGGGAAATGCTTTTTTACCCTGGGACAGATTGCTCTTGCTTAACAGAATTCCCTTCCCCGGAATCACTAAAAAATCGAGTTATTATATCAACGAAACCTCCGAAAGAACGTTTTAAGTCCAACCGTATCAAGGACAATCCTATGCTGAATGAAAGTGATTCATCTGAAGAAGAAACATGGGGAAATGAATCTCCAGACTCTAACAAGAACGAAGTGGAGACTGAGGACACCAATGGAAGCGATCGTGATGAGGGAAATGTAAGTGCATGTGAATGTGACCATAAACCATATCAGGAGTGTTCACCTGATTACAAACACATAATTACTATCCATAATACGAAGCTCAAGGGATGCATGAAGGATAAATTGAAAACAGACGGTGAAGTTAGACGCCTAAGTTGGAGTGAGAAGACCCTTGAAAAGGCTTCAGAATCTCATGGAACAGATATTCTTAGGTTCACACAGAAAAATATCCTCAGGGTTTACCCAAGTGCAATGCGTGTCAAATCCTCAAATTTCAAGCCACATATTGGGTGGATGTACGGGGCTCAAATGGTTGCATGCAATATGCAGGGGCTTGGCAAATCGCTCTGGTTGATGCAGGGTATGTTCAGGGCAAATGGAGGCTGTGGTTATGTAAAGAAGCCTCAATTTCTAATGGAGAAGCATCAATGTGACAATGAGTTTGATCCTACAAGGATACAGTCAGTGAAGAAGAAGACATTAAAGGTAAAAGTATACATGGGACACGGTTGGAGCTCAGATTTCAGTCCTACACACTTTGACAAATGCTCCCCGCCGGACTTTTACACTAAGGTCCGTATTGTTGGAATGCCAGCTGATGTTGCAAAGAAGAAAACAAAGGTTATGATGGATGATTGGTTTCCTGTTTGGGATGAAGAATTTGAATTCTCTTTAATTGTTCCAGAGCTTGCATTGCTTCTGATACAAGTAAAGGACAAAGATCCTGGAAAGGATGACTTTGCTGGACAGACATGTTTGCCAGTGTCAGAGCTAAAACATGGATTTCGTTCAGTCCCTTTATATAACAAAAAGGGTGAGAAATTTAAATCTGTAAAGCTGTTGATGCGGTTTCAGTTTGAATGA 1812 0.4123 MGNNMATYNKYKSFLFFIRKFKVTEPVSPQDLEEAFSKFTGGGSHMSADELHRFLVEHQGEEDYTLLDSEKVVEKVLKERKRCQESVKVDQNREHEITLDELFRFLLHDDSNGPLKAEVHHDMGAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALKRGVRVIELDLWPTYNKHDIKVDHGWTLTNPASVIKCLESIKEYGFVASQYPVIITIEDHLTTDLRAKFAEMATQIFGEMLFYPGTDCSCLTEFPSPESLKNRVIISTKPPKERFKSNRIKDNPMLNESDSSEEETWGNESPDSNKNEVETEDTNGSDRDEGNVSACECDHKPYQECSPDYKHIITIHNTKLKGCMKDKLKTDGEVRRLSWSEKTLEKASESHGTDILRFTQKNILRVYPSAMRVKSSNFKPHIGWMYGAQMVACNMQGLGKSLWLMQGMFRANGGCGYVKKPQFLMEKHQCDNEFDPTRIQSVKKKTLKVKVYMGHGWSSDFSPTHFDKCSPPDFYTKVRIVGMPADVAKKKTKVMMDDWFPVWDEEFEFSLIVPELALLLIQVKDKDPGKDDFAGQTCLPVSELKHGFRSVPLYNKKGEKFKSVKLLMRFQFE* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0504 603 MobiDBLite consensus disorder prediction 271 286 - -
Gso14g0504 603 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Gso14g0504 603 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Gso14g0504 603 PRINTS Phospholipase C signature 251 268 IPR001192 GO:0035556
Gso14g0504 603 PRINTS Phospholipase C signature 393 414 IPR001192 GO:0035556
Gso14g0504 603 PRINTS Phospholipase C signature 414 432 IPR001192 GO:0035556
Gso14g0504 603 PRINTS Phospholipase C signature 569 579 IPR001192 GO:0035556
Gso14g0504 603 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 368 454 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso14g0504 603 Gene3D C2 domain 468 603 IPR035892 -
Gso14g0504 603 ProSiteProfiles C2 domain profile. 458 585 IPR000008 -
Gso14g0504 603 SMART plcx_3 121 267 IPR000909 -
Gso14g0504 603 ProSitePatterns EF-hand calcium-binding domain. 90 102 IPR018247 -
Gso14g0504 603 SMART plcy_3 339 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso14g0504 603 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 603 - -
Gso14g0504 603 MobiDBLite consensus disorder prediction 271 321 - -
Gso14g0504 603 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 603 IPR001192 GO:0035556
Gso14g0504 603 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 476 602 IPR035892 -
Gso14g0504 603 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 267 IPR000909 -
Gso14g0504 603 SUPERFAMILY PLC-like phosphodiesterases 121 456 IPR017946 GO:0006629|GO:0008081
Gso14g0504 603 SMART C2_3c 476 583 IPR000008 -
Gso14g0504 603 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 346 453 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso14g0504 603 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 267 - -
Gso14g0504 603 Gene3D - 27 113 - -
Gso14g0504 603 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 467 IPR017946 GO:0006629|GO:0008081
Gso14g0504 603 Pfam C2 domain 476 577 IPR000008 -
Gso14g0504 603 SUPERFAMILY EF-hand 11 123 IPR011992 -
Gso14g0504 603 CDD C2_PLC_like 482 603 - -
Gso14g0504 603 MobiDBLite consensus disorder prediction 297 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0504 Gso-Chr14 4831850 4836268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0504 3 603 Acyl Lipid Metabolism Gene Families AT2G40116 54.194 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0504 K05857 - gmx:100820253 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0504 14 4831850 4836268 Gso2g2185 2 46524883 46528931 GST
Gso18g0243 18 2111863 2116399 Gso14g0504 14 4831850 4836268 PCT
Gso13g1376 13 29277845 29282341 Gso14g0504 14 4831850 4836268 PCT
Gso14g0504 14 4831850 4836268 Gso18g0243 18 2111863 2116399 PCT
Gso14g0504 14 4831850 4836268 Gso13g1376 13 29277845 29282341 PCT