Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0243 ATGAAAACAGAGAAAAATAGTGGCTCTGCTTCCAAGGGCAAGGTAAGAAAGAAAATGGAAACATGCATAATCAAGGTGTTAAATTTCTCCACCAAAAAAGGTGATGTCTACAAGGCAGAACCACCCCTGGACCTTAAGGAAGCCTTTTCCAAGTTTGCCAGAGGAGAGAATCAAATGAAGAAGGATCAGCTACTTCGGTTCATGGTGGAACACCAGGGAGAAAATATCAGTACCATAGAGGATTTGGATAAAATTGTTGAAAAGTTTTTGCAACTGGGAAGTTCTTGTTCTAGCACCAAAACTAGCTCCACAAGAATTGTGGATGTTTATAGGAAACAAGGATTAAGCCTCAATGACTTCATCGATTTTCTGCTTCTTGGTGATTTCAATGGTCCCTTGAAAGACGAGGTACATCATGATATGGATGCTCCCTTGTCACATTATTTCATGTATACGGGACACAATTCCTATCTGACTGGGAATCAACTCACCAGTGAGAGCAGTGACGAGCCAATTATTGAGGCTTTGAAACAAGGTGTACGAGTAATTGAACTAGATTTATGGCCATCCAAATCTTCAAATAATGATGGAATTAAAGTGGTTCACGGAAGGACTTTTACCACTTCAGTCCCGGTATCCAAATGTCTACAATCCATAAAGGATTATGCATTTCATAAATCTGATTATCCAGTAATTCTAACTTTGGAAGACCACCTAACACCAAAACATCATGATAAATTTGCAAAAATGGCAACTGAAATATTTGGAGAAACGCTTTACTTTCCTGAGACAGATCATTTGACAGAATTCCCCTCACCAGAATCATTGAAAAAACGGATAATTATATCAACCAAACCACCAAAGGAATGTCGACAATCTGCTATTATCAGTAAACCTGTGCCAAATGGAAGAGAACCATCTGAAGAAGAATCACGAGGTCTTGAATTGCCAAGTTCTGTGGCTAAACTGAAAACTGAGGACAGGAATTCTAGTGATGAAGATCAGGAAGATGTAAATACAAGTGATAACAAACCAAACCAACAAGATGCGCGTCAATACAAACACTTGATTGCAATCCATGGTGGGAAATCAAAAGGTTCTATGAAGAATCGGCTGAAAGATGATATTAAAGTTAGACGTCTAAGTTTGAGTGAGAAGAAACTGAAAAGTGCTTCCGAGTCTCATGGAGCCGACCTTATTAGGTTCACACAGAGAAATATCCTCAGAGTTTTTCCTAAAGGAGAACGTGTCCAATCCTCAAATTTCAGGCCATATTTAGGGTGGTTGTATGGAGTTCAGATGGTTGCATTCAATATGCAGGGGCATGGCAAATCACTCCGGTTGATGCGGGGTATGTTCAAAGCAAATGGAGGGTGTGGTTACGTTAAGAAGCCTGAATTTCTGATCCGAACACTTCCACATGAAGAGGTGTTTGATCCAAAAAAACCACCTTCAGTGAAGCAGATATTAAAAGTAAAAGTATACAAAGGAGATGGCTGGAGTTTAGATTTCAGTCCAACAGATTTTGATCGATTCTCTCCACCCGACTTTTACACAGAGGTCAGTATTGTTGGAGTGCCAGCTGATTGTGACAAGAACAAAACAAGAGTAAAGACGGATACATGGTATCCTGTTTGGGATGAAGAATTTGAATTCAAATTGAGGGTTCCAGAGCTTGCTTTGCTTCGGATAGAAGTAAAGGACAAAGATAAGGGAAAAAAGGATGACTTTGCCGGACAAACTTGTTTGCCAATATCAGAGCTAAGAAATGGATTTCGGTCAGTCCCTCTCTATGACAGAAAGGGAAAGAAATATAAATCTGTGACGCTTCTAATGCGGTTTAAGCTTGAAACTTTAAATAAATTGTAG 1869 0.3943 MKTEKNSGSASKGKVRKKMETCIIKVLNFSTKKGDVYKAEPPLDLKEAFSKFARGENQMKKDQLLRFMVEHQGENISTIEDLDKIVEKFLQLGSSCSSTKTSSTRIVDVYRKQGLSLNDFIDFLLLGDFNGPLKDEVHHDMDAPLSHYFMYTGHNSYLTGNQLTSESSDEPIIEALKQGVRVIELDLWPSKSSNNDGIKVVHGRTFTTSVPVSKCLQSIKDYAFHKSDYPVILTLEDHLTPKHHDKFAKMATEIFGETLYFPETDHLTEFPSPESLKKRIIISTKPPKECRQSAIISKPVPNGREPSEEESRGLELPSSVAKLKTEDRNSSDEDQEDVNTSDNKPNQQDARQYKHLIAIHGGKSKGSMKNRLKDDIKVRRLSLSEKKLKSASESHGADLIRFTQRNILRVFPKGERVQSSNFRPYLGWLYGVQMVAFNMQGHGKSLRLMRGMFKANGGCGYVKKPEFLIRTLPHEEVFDPKKPPSVKQILKVKVYKGDGWSLDFSPTDFDRFSPPDFYTEVSIVGVPADCDKNKTRVKTDTWYPVWDEEFEFKLRVPELALLRIEVKDKDKGKKDDFAGQTCLPISELRNGFRSVPLYDRKGKKYKSVTLLMRFKLETLNKL* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0243 622 CDD C2_PLC_like 487 617 - -
Gso18g0243 622 MobiDBLite consensus disorder prediction 288 350 - -
Gso18g0243 622 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 19 622 - -
Gso18g0243 622 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 378 467 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso18g0243 622 SMART plcx_3 139 285 IPR000909 -
Gso18g0243 622 Gene3D - 41 130 - -
Gso18g0243 622 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 382 468 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso18g0243 622 Pfam Phosphatidylinositol-specific phospholipase C, X domain 141 285 IPR000909 -
Gso18g0243 622 Gene3D Phosphatidylinositol (PI) phosphodiesterase 135 482 IPR017946 GO:0006629|GO:0008081
Gso18g0243 622 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 139 285 - -
Gso18g0243 622 ProSiteProfiles C2 domain profile. 471 599 IPR000008 -
Gso18g0243 622 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 489 615 IPR035892 -
Gso18g0243 622 SUPERFAMILY PLC-like phosphodiesterases 139 470 IPR017946 GO:0006629|GO:0008081
Gso18g0243 622 Pfam C2 domain 489 591 IPR000008 -
Gso18g0243 622 PRINTS Phospholipase C signature 144 162 IPR001192 GO:0035556
Gso18g0243 622 PRINTS Phospholipase C signature 170 190 IPR001192 GO:0035556
Gso18g0243 622 PRINTS Phospholipase C signature 269 286 IPR001192 GO:0035556
Gso18g0243 622 PRINTS Phospholipase C signature 407 428 IPR001192 GO:0035556
Gso18g0243 622 PRINTS Phospholipase C signature 428 446 IPR001192 GO:0035556
Gso18g0243 622 PRINTS Phospholipase C signature 583 593 IPR001192 GO:0035556
Gso18g0243 622 Gene3D C2 domain 483 621 IPR035892 -
Gso18g0243 622 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 19 622 IPR001192 GO:0035556
Gso18g0243 622 MobiDBLite consensus disorder prediction 321 340 - -
Gso18g0243 622 SMART plcy_3 353 469 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso18g0243 622 SMART C2_3c 489 597 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0243 Gso-Chr18 2111863 2116399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0243 25 617 Acyl Lipid Metabolism Gene Families AT2G40116 53.171 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0243 K05857 - gmx:100788788 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0243 18 2111863 2116399 Gso18g0243 18 2111863 2116399 ECH
Gso18g0243 18 2111863 2116399 Gso13g1376 13 29277845 29282341 GST
Gso18g0243 18 2111863 2116399 Gso14g0504 14 4831850 4836268 PCT
Gso18g0243 18 2111863 2116399 Gso2g2185 2 46524883 46528931 PCT
Gso14g0504 14 4831850 4836268 Gso18g0243 18 2111863 2116399 PCT
Gso2g2185 2 46524883 46528931 Gso18g0243 18 2111863 2116399 PCT