Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2164 ATGACGGCGAGGAGGTTATCGGATGTGGTGCTGGACTGCGTGATGCCATACATACACGACTCCAAGGACCGCGACGCCGTGTCGCAGGTGTGCAGGCGGTGGTACGAGCTCGACTCGCTCACTCGTAAACACGTCACTATTGCGCTGTGTTACACCACCACGCCGGACCGGCTAAGGCGGCGGTTCCCGCACCTGGAGTCGCTGAAGCTGAAGGGAAAGCCGCGGGCGGCGATGTTCAACCTGATACCTGAGGATTGGGGAGGTTTCGTCACGCCTTGGGTCAGAGTGATCTCTCAATACTTTGATTGCTTGAAGTCGCTTCACTTTCGGCGCATGATTGTGAGGGATTCGGATCTTCAAGTTCTAGCTCGTTCGCGCGGTCACGTACTTCAAGCACTCAGGCTGGAAAATTGCTCTGGATTCTCCACTGATGGCCTCTACTATATCGGTCGTTATTGCAGGAATTTAAGAGTCTTGTTTTTAGAGGAAAGCTCACTTGTTGAGAAGGATGGTGACTGGCTCCATGAGCTTGCTTTGAATAATACAGTTCTTGAGACACTGAATTTTTACGTGACTGATATTGCCAACGTCAGAATCCAGGACCTTGAACTTATAGCCAGAAATTGCCCGAACTTAAACTCTGTGAAAATTACTGATTGTGAAGTATTAGATCTGGTGAACTTCTTTCAATATGCATCTGCTCTAGAAGAATTTTCTGGAGGTTCCTACAACGAGGAATCGGAGAAGTACTCTGCTATGTCATTGCCAGCAAAATTAAGTCGTTTGGGTTTGACATATATTACAAAGAATGAAATGCCCATAGTGTTCCCTTATGCGGCCTTACTGAAAAAATTAGATCTTCTTTATGCAATGCTGGATACAGAGGACCATTGTACGTTAATCCAAAGGTGCCCCAACTTGGAAGTCCTTGAGTCAAGGAATGTGATTGGAGACAGAGGATTAGAAGTGCTTGCTCGCTGTTGTAGGAGGCTTAAAAGGATTAGGATTGAACGAGGTGATGATGATCAAGGAATGGAGGATGAAGAAGGTGTTGTTTCCCAGAGAGGACTAATTGCTTTGTCACATGGCTGTCCAGAACTCGAATACTTGGCGGTATACGTATCCGACATTACAAATGCATCTCTAGAACACATTGGTACTCACTTGAAAAACCTTTGTGATTTTCGCCTTGTCTTGCTAGACCGCGAAGAAAAGATAACTGATTTGCCACTTGACAACGGAGTGAGGGCTCTACTGAGGGGTTGTGACAAGCTTAGAAGATTTGCTCTGTATCTGAGACCTGGGGGATTGACTGATGTTGGGCTAGGTTACGTAGGGCAATACAGCCCCAACGTGAGATGGATGCTTCTTGGTTATGTGGGAGAGACTGATGCAGGGCTTTTGGAATTCTCTAAGGGCTGCCCCAGTCTTCAGAAACTTGAAATGAGAGGATGCTCCTTTTTCAGTGAGTATGCACTAGCTATTGCTGCAACTCAACTGAATTCTCTCAGGTACCTATGGGTGCAAGGGTATAGTGCATCTGCATCTGGACGCGATCTTCTGGCAATGGCTCGCCCCTATTGGAACATTGAGCTGATTCCTTCTAGAAGCGTGGTTGTTAGCAATCAGCAAGAAGAGCCTGTAGTTGTCGAGCACCTGGCTCATATTCTTGCATATTACTCTCTTGCTGGCCCAAGAACAGATTTTCCAGATACCGTAATACCTTTGGATCCTGGAACATATGTTGACACCTAA 1755 0.4667 MTARRLSDVVLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPDRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGFVTPWVRVISQYFDCLKSLHFRRMIVRDSDLQVLARSRGHVLQALRLENCSGFSTDGLYYIGRYCRNLRVLFLEESSLVEKDGDWLHELALNNTVLETLNFYVTDIANVRIQDLELIARNCPNLNSVKITDCEVLDLVNFFQYASALEEFSGGSYNEESEKYSAMSLPAKLSRLGLTYITKNEMPIVFPYAALLKKLDLLYAMLDTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLARCCRRLKRIRIERGDDDQGMEDEEGVVSQRGLIALSHGCPELEYLAVYVSDITNASLEHIGTHLKNLCDFRLVLLDREEKITDLPLDNGVRALLRGCDKLRRFALYLRPGGLTDVGLGYVGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQKLEMRGCSFFSEYALAIAATQLNSLRYLWVQGYSASASGRDLLAMARPYWNIELIPSRSVVVSNQQEEPVVVEHLAHILAYYSLAGPRTDFPDTVIPLDPGTYVDT* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2164 584 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 5 579 - -
Gso2g2164 584 SMART LRR_CC_2 209 228 IPR006553 -
Gso2g2164 584 SMART LRR_CC_2 474 499 IPR006553 -
Gso2g2164 584 SMART LRR_CC_2 304 327 IPR006553 -
Gso2g2164 584 SMART LRR_CC_2 127 152 IPR006553 -
Gso2g2164 584 SMART LRR_CC_2 364 388 IPR006553 -
Gso2g2164 584 SMART LRR_CC_2 422 448 IPR006553 -
Gso2g2164 584 Pfam Transport inhibitor response 1 protein domain 63 109 IPR041101 -
Gso2g2164 584 SUPERFAMILY RNI-like 95 522 - -
Gso2g2164 584 Pfam F-box 5 44 IPR041567 -
Gso2g2164 584 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 5 579 - -
Gso2g2164 584 Gene3D - 1 42 - -
Gso2g2164 584 Gene3D Ribonuclease Inhibitor 43 579 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2164 Gso-Chr2 46286685 46292222 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2164 K13463 - gmx:100819069 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0528 14 5066800 5072536 Gso2g2164 2 46286685 46292222 GST
Gso18g0269 18 2385938 2390040 Gso2g2164 2 46286685 46292222 PCT
Gso13g1350 13 28970803 28974951 Gso2g2164 2 46286685 46292222 PCT
Gso2g2164 2 46286685 46292222 Gso18g0269 18 2385938 2390040 PCT
Gso2g2164 2 46286685 46292222 Gso13g1350 13 28970803 28974951 PCT