Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0269 ATGACGGAGGAACGGAACGTGCGGAAGACACGTGTGGTCGACGTGGTCCTCGACTGCGTCATCCCTTACATCGACGACCCCAAGGACCGCGACGCCGTTTCCCAGGTGTGTCGACGCTGGTACGAGCTCGACTCGCTCACCCGCAAGCACGTCACCATCGCGCTCTGCTACACCACCACCCCGGCTCGCCTCCGCCGCCGCTTCCCGCACCTCGAGTCGCTCAAGCTCAAGGGCAAGCCCCGAGCCGCAATGTTCAACTTGATACCCGAGGATTGGGGCGGACACGTCACTCCCTGGGTCAAAGAGATTTCTCAGTACTTCGATTGCCTCAAGAGCCTCCACTTCCGCCGCATGATTGTCAAGGATTCCGATCTTCAGAATCTCGCTCGTGACCGCGGTCACGTGCTTCACGCTCTCAAGCTTGACAAGTGCTCCGGTTTCACCACCGATGGTCTTTTCCATATCGGTCGCTTTTGCAAGAGTTTAAGAGTCTTGTTTTTGGAGGAAAGCTCAATTCTTGAGAAGGACGGAGAATGGCTACACGAGCTTGCTTTGAATAATACAGTTCTTGAGACTCTCAATTTTTACTTGACAGACATTGCTGTTGTGAAGATTGAGGACCTTGAACTTTTAGCTAAAAATTGCCCCAACTTAGTGTCTGTGAAACTTACTGACTGTGAAATACTGGATCTTGTGAACTTCTTTAAGCATGCCTCTGCGCTGGAAGAGTTTTGTGGAGGCACCTACAACGAGGAACCAGAAAGATACTCTGCTATATCATTACCAGCAAAGTTATGTCGATTGGGTTTAACATATATTGGAAAGAATGAGTTGCCCATTGTGTTCATGTTTGCAGCCGTACTAAAAAAATTGGATCTCCTCTATGCAATGCTAGACACGGAGGATCATTGTATGTTAATCCAAAGGTGTCCAAATCTGGAAGTCCTTGAGACAAGGAATGTAATTGGAGATAGAGGGTTAGAGGTTCTTGGTCGTTGTTGTAAGAGGCTAAAAAGGCTTAGGATTGAAAGGGGCGATGATGATCAAGGAATGGAGGATGAAGAAGGTACTGTGTCCCATAGAGGGCTAATAGCCTTGTCACAGGGCTGTTCAGAGCTTGAATACATGGCTGTTTATGTGTCTGATATTACAAATGCATCTCTGGAACATATTGGAACTCACTTGAAGAACCTCTGTGATTTTCGCCTTGTGTTGCTTGACCATGAAGAGAAGATAACTGATTTGCCACTTGACAATGGGGTGAGGGCTCTACTGAGGGGCTGTGACAAGCTGAGGAGATTTGCTCTATATCTCAGGCGTGGCGGGTTGACTGATGTAGGCCTTGGTTACATTGGACAATACAGTCCAAATGTGAGATGGATGCTGCTTGGTTATGTGGGGGAGTCTGATGCAGGGCTTTTGGAGTTCGCTAAGGGGTGTCCTAGTCTTCAGAAACTTGAAATGAGAGGGTGTTTATTTTTCAGTGAACGTGCACTTGCTGTGGCTGCAACACAATTGACTTCTCTTAGGTACTTGTGGGTGCAAGGTTATGGTGTATCTCCATCTGGACGTGATCTTTTGGTAATGGCTCGACCCTTTTGGAACATTGAGTTGATTCCTTCTAGAAAGGTGGCTACGAATACCAATCCAGATGAGACTGTAGTTGTTGAGCATCCTGCTCATATTCTTGCATATTATTCTCTTGCAGGGCAGAGATCAGATTTTCCAGATACTGTTGTGCCTTTGGACACTGCCACATGCGTTGATACCTAG 1773 0.4755 MTEERNVRKTRVVDVVLDCVIPYIDDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPARLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWVKEISQYFDCLKSLHFRRMIVKDSDLQNLARDRGHVLHALKLDKCSGFTTDGLFHIGRFCKSLRVLFLEESSILEKDGEWLHELALNNTVLETLNFYLTDIAVVKIEDLELLAKNCPNLVSVKLTDCEILDLVNFFKHASALEEFCGGTYNEEPERYSAISLPAKLCRLGLTYIGKNELPIVFMFAAVLKKLDLLYAMLDTEDHCMLIQRCPNLEVLETRNVIGDRGLEVLGRCCKRLKRLRIERGDDDQGMEDEEGTVSHRGLIALSQGCSELEYMAVYVSDITNASLEHIGTHLKNLCDFRLVLLDHEEKITDLPLDNGVRALLRGCDKLRRFALYLRRGGLTDVGLGYIGQYSPNVRWMLLGYVGESDAGLLEFAKGCPSLQKLEMRGCLFFSERALAVAATQLTSLRYLWVQGYGVSPSGRDLLVMARPFWNIELIPSRKVATNTNPDETVVVEHPAHILAYYSLAGQRSDFPDTVVPLDTATCVDT* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0269 590 Pfam F-box 10 50 IPR041567 -
Gso18g0269 590 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 10 585 - -
Gso18g0269 590 Gene3D - 2 48 - -
Gso18g0269 590 Gene3D Ribonuclease Inhibitor 49 586 IPR032675 -
Gso18g0269 590 Pfam Transport inhibitor response 1 protein domain 69 115 IPR041101 -
Gso18g0269 590 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 10 585 - -
Gso18g0269 590 SUPERFAMILY RNI-like 84 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0269 Gso-Chr18 2385938 2390040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0269 K13463 - gmx:100779171 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0269 18 2385938 2390040 Gso18g0269 18 2385938 2390040 ECH
Gso18g0269 18 2385938 2390040 Gso13g1350 13 28970803 28974951 GST
Gso18g0269 18 2385938 2390040 Gso14g0528 14 5066800 5072536 PCT
Gso18g0269 18 2385938 2390040 Gso2g2164 2 46286685 46292222 PCT
Gso14g0528 14 5066800 5072536 Gso18g0269 18 2385938 2390040 PCT
Gso2g2164 2 46286685 46292222 Gso18g0269 18 2385938 2390040 PCT