Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0528 ATGGAGGATCGGGACGCGAAGCGGATGGCGACGAGGTTATCGGATGTGGTTCTGGACTGCGTGATGCCGTACATACACGACTCCAAGGACCGCGACGCCGTGTCGCAGGTGTGCCGCCGGTTGTACGAGCTCGACTCGCTCACGCGTAAGCACGTGACAATCGCACTGTGTTACACCACCACGCCGGACCGTTTAAGGCGGCGGTTCCCGCACCTGGAGTCGTTAAACCTGAAGGGAAAGCCGCGGGCGGCGATGTTCAACCTGATACCGGAGGATTGGGGAGGTTTCGTCACGCCTTGGGTCAGAGAGATCTCTCAGTACTTCGATTGCTTGAAGTCGCTTCACTTTCGGCGTATGATTGTAAGGGATTCGGATCTTCAAGTTCTAGCTCGTTCGCGCGGACACATACTTCAAGCACTCAAGCTGGATAAGTGCTCTGGATTCTCCACCGATGGCCTCTACTATATCGGTCGTTATTGCAGGAACTTAAGAGTCTTGTTTTTAGAGGAAAGCTCACTTGTTGAGAATGATGGTGACTGGCTCCATGAGCTTGCTTTGAATAATACAGTTCTTGAGACACTGAATTTTTACTTGACTGATATTGCCAACGTCAGAATCCAGGACCTTGAACTTATAGCCAGAAATTGCCCCAACTTAAACTCTGTGAAAATTACTGATTGTGAAGTATTAGATCTGGTGAACTTCTTTCGATATGCATCTGCTCTAGAAGAATTTTGTGGAGGTTCCTACAACGAGGAATCGGAGAAGTACTCTGCTATATCATTGCCAGCAAAATTAAGTCGTTTGGGTTTGACATATATTACAAAGAATGAAATGCCCATGGTGTTCCCTTATGCAGCCTTACTGAAAAAATTGGATCTTCTCTATGCAATGCTGGATACAGAGGACCATTGTACGTTAATCCAAAGGTGCCCCAACTTGGAGGTCCTTGAGTCAAGGAATGTAATTGGAGACAGAGGATTAGAAGTGCTTGCTCGCTGTTGTAGGAGGCTTAAAAGGCTTAGGATTGAACGGGGAGATGATGATCAAGGAATGGAGGATGAAGAAGGTGTTGTTTCCCAGAGAGGACTAATTGCTTTGTCACATGGCTGTCCAGAACTCGAATACTTGGCCGTCTACGTATCCGACATTACAAATGCATCTCTAGAACACATTGGTACTCACTTGAAAAACCTTTGTGATTTTCGCCTTGTCTTGCTAGACCGCGAAGAGAAAATAACTGATTTGCCACTTGACAACGGAGTGAGGGCTCTACTGAGGGGTTGTGACAAGCTCAGAAGATTTGCTCTATATCTCAGACCTGGGGGATTGACTGATGTAGGGCTCGGTTACATAGGGCAATACAGCCCCAACGTGAGATGGATGCTTCTTGGTTATGTGGGAGAGACTGATGCAGGGCTTTTGGAATTCTCTAAGGGTTGCCCCAGTCTTCAGAAACTTGAGATGAGGGGATGTTCCTTTTTCAGTGAGTATGCACTAGCTATTGCTGCAACTCAACTGAATTCTCTCAGGTACCTATGGGTGCAAGGGTATGGAGCATCTCCATCTGGACGCGATCTTCTGGCAATGGCTCGCCCCTATTGGAACATTGAGTTGATTCCTTCTAGACGCGTTGTTGTTAGCAATCAGCAAGAAGAGCCCGTAGTTGTTGAGCACCCGGCTCATATTCTTGCATATTACTCTCTTGCTGGCCCAAGAACAGATTTTCCAGATACTGTTATACCTTTGGATCCTGCAACATATGTTGACACCTAA 1776 0.4707 MEDRDAKRMATRLSDVVLDCVMPYIHDSKDRDAVSQVCRRLYELDSLTRKHVTIALCYTTTPDRLRRRFPHLESLNLKGKPRAAMFNLIPEDWGGFVTPWVREISQYFDCLKSLHFRRMIVRDSDLQVLARSRGHILQALKLDKCSGFSTDGLYYIGRYCRNLRVLFLEESSLVENDGDWLHELALNNTVLETLNFYLTDIANVRIQDLELIARNCPNLNSVKITDCEVLDLVNFFRYASALEEFCGGSYNEESEKYSAISLPAKLSRLGLTYITKNEMPMVFPYAALLKKLDLLYAMLDTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLARCCRRLKRLRIERGDDDQGMEDEEGVVSQRGLIALSHGCPELEYLAVYVSDITNASLEHIGTHLKNLCDFRLVLLDREEKITDLPLDNGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQKLEMRGCSFFSEYALAIAATQLNSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRVVVSNQQEEPVVVEHPAHILAYYSLAGPRTDFPDTVIPLDPATYVDT* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0528 591 SUPERFAMILY RNI-like 88 400 - -
Gso14g0528 591 Pfam F-box 11 51 IPR041567 -
Gso14g0528 591 Gene3D - 1 49 - -
Gso14g0528 591 Gene3D Ribonuclease Inhibitor 50 587 IPR032675 -
Gso14g0528 591 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 10 586 - -
Gso14g0528 591 SUPERFAMILY RNI-like 364 518 - -
Gso14g0528 591 Pfam Transport inhibitor response 1 protein domain 70 116 IPR041101 -
Gso14g0528 591 SMART LRR_CC_2 134 159 IPR006553 -
Gso14g0528 591 SMART LRR_CC_2 216 235 IPR006553 -
Gso14g0528 591 SMART LRR_CC_2 371 395 IPR006553 -
Gso14g0528 591 SMART LRR_CC_2 311 334 IPR006553 -
Gso14g0528 591 SMART LRR_CC_2 481 506 IPR006553 -
Gso14g0528 591 SMART LRR_CC_2 429 455 IPR006553 -
Gso14g0528 591 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 10 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0528 Gso-Chr14 5066800 5072536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0528 K13463 - gmx:100793081 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0528 14 5066800 5072536 Gso2g2164 2 46286685 46292222 GST
Gso18g0269 18 2385938 2390040 Gso14g0528 14 5066800 5072536 PCT
Gso13g1350 13 28970803 28974951 Gso14g0528 14 5066800 5072536 PCT
Gso14g0528 14 5066800 5072536 Gso18g0269 18 2385938 2390040 PCT
Gso14g0528 14 5066800 5072536 Gso13g1350 13 28970803 28974951 PCT