Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2149 ATGGATGCTTTATGCAACAAGGGTGAAAATTTTCAAAAGAAAAAAGATGGGGTTCCTTCTTCTTCTAGTGATTCAACTCACGAATGTTCTTCTCCTTCTCTTGGCTGGCCTATTCGGAAGGCTACACTCTCCAAATGCCGCAAATCAGATGAAAAAGAAAATGAACCTGTTTCTCACTTGGAAGATTCAAAATTTACCACTGTCAGTTCCAAAATGTCAGGAATTGATGCAATGAAGGAAAGGTTTGCAAAATTACTGCTTGGGGAAGATATGTCAGGATCTGGGAAAGGAGTGTGCAGTGCTTTGGCCATCTCTAATGCTATCACTAATCTCTGTGCAACTGTGTTTGGGCAATTGTGGAGACTAGAACCTATACCTTGTGAAAAGAAAGAAATGTGGCGGAGAGAGATGGAATGGCTTCTTAGTGTTAGTGATCACATTGTTGAGTTAATTCCTTCTTGGCAAACATTTCCAGATGGAAGTAAGCTTGAGGTAATGACTTGCAGGCCAAGGTCAGATCTTTTCATGAATCTTCCAGCTCTGCACAAACTTGACAATATGCTTCTTGAAATTTTAGATGGTTGCAAGGATATGGAGTTTTGGTATGTTGACCAAGGGATTGTAGCCCAAGATGCAGATGGATCAGCTTCATTTTGCAAAAGAATTCAACGGCAAGAGGATAAATGGTGGCTCCCAGTTCCTCGTGTCCCCCCTTCTGGCCTCAGTGAGAACTCAAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGCCAAATACTAAAAGCTTCTATGGCTATCAACAACGGTGCTTTAGCTGAAATGGAAGTTCCCGAGTCATACTTGGAAACCCTTCCTAAGAATGGAAGGACTTGCTTGGGGGATTTTATTTACCATTACATCACATCAGAGAAATTCTCTCCAGAGTGCCTGCTTGATTGCCTAGACCTCTCCTCTGAGCATGTTGCACTAGAGATTGCAAACTGTGTGGAAGCCTCGATATACGTGTGGCGTAGAAGAGCTCACTCTAAACCCCCAGCTAATCCTAATCGTTCATCTACAAAGTCATCCTGGGAAATTGTCAAGGACTTCATGGCTGATGGAGATAAGAGAGAACTACTAGCAGAAAGAGCTGAAAATGTTCTACTTTCATTGAAGCAAAGATTCCCAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGGATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATGGCATTTAACATCGTGGCTCGCATAGAAGATTTGCTATATGTGGATGACTTAACAAAACATTCAGATAGGTTTCCTCTGGTTCCAATGACAGTGTCTGTCTCAGGCACTCCTCATAAAGCAATTGGCACACCAAGAAGCTTTTCACCTGCACCACCACTAATTAGTCCTGCAAGGGGAGAGAGATCCCCTTTCCTTGGCAACAACCACAACAACAATAATAATATCAAACCTCAACGTCGTGGCTTCGGGGTGAGAAGAGTATTGTCAAATTATCTAGGGGCAGAATCTAAAGAAACAAAGATTTTAAGCAATTCAACTGTGGTGAATGGTTCAAACACAAGCAACAATAAGGAAGAACAACCAGAACGTCAAAAGAAATCACATGCCATGCATGGCAAGACAAAATGA 1674 0.4205 MDALCNKGENFQKKKDGVPSSSSDSTHECSSPSLGWPIRKATLSKCRKSDEKENEPVSHLEDSKFTTVSSKMSGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFGQLWRLEPIPCEKKEMWRREMEWLLSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALHKLDNMLLEILDGCKDMEFWYVDQGIVAQDADGSASFCKRIQRQEDKWWLPVPRVPPSGLSENSRKQLNHTRECASQILKASMAINNGALAEMEVPESYLETLPKNGRTCLGDFIYHYITSEKFSPECLLDCLDLSSEHVALEIANCVEASIYVWRRRAHSKPPANPNRSSTKSSWEIVKDFMADGDKRELLAERAENVLLSLKQRFPGLTQTTLDTSKIQCNKDIGKSILESYSRVLESMAFNIVARIEDLLYVDDLTKHSDRFPLVPMTVSVSGTPHKAIGTPRSFSPAPPLISPARGERSPFLGNNHNNNNNIKPQRRGFGVRRVLSNYLGAESKETKILSNSTVVNGSNTSNNKEEQPERQKKSHAMHGKTK* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2149 557 MobiDBLite consensus disorder prediction 524 557 - -
Gso2g2149 557 Gene3D PRONE domain, subdomain 1 67 305 - -
Gso2g2149 557 Gene3D PRONE domain, subdomain 1 306 446 - -
Gso2g2149 557 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 17 528 - -
Gso2g2149 557 MobiDBLite consensus disorder prediction 1 36 - -
Gso2g2149 557 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 17 528 IPR038937 GO:0005085
Gso2g2149 557 MobiDBLite consensus disorder prediction 524 539 - -
Gso2g2149 557 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 75 441 IPR005512 GO:0005085
Gso2g2149 557 MobiDBLite consensus disorder prediction 15 32 - -
Gso2g2149 557 ProSiteProfiles PRONE domain profile. 65 447 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2149 Gso-Chr2 46133848 46137380 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2149 - - gmx:100814278 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0546 14 5217216 5220663 Gso2g2149 2 46133848 46137380 GST
Gso18g0285 18 2564483 2568094 Gso2g2149 2 46133848 46137380 PCT
Gso13g1332 13 28772192 28775815 Gso2g2149 2 46133848 46137380 PCT
Gso2g2149 2 46133848 46137380 Gso18g0285 18 2564483 2568094 PCT
Gso2g2149 2 46133848 46137380 Gso13g1332 13 28772192 28775815 PCT