Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0546 ATGGAGACTTTAGGCAACAAGGGTGAAAATTTTCAAAAGAAAAAAGATGGGGTTCCTTCTTCTGCTAGTGATTCAACTCACGAAGCCAAAGGGTGTTCTCCTCCTCCTCTTGGTTGGCCTATTCGGAAGGCTACACTCTCCAAATGCCGTAAATCAGATGAAAAAGAAAATGAACCTGTTTCTCACTTGGAAGATTCAAAATTTACCACCGTCAGTTCAAAAATGTCAGGAATTGATGCAATGAAGGAAAGGTTTGCCAAATTACTGCTTGGGGAAGACATGTCAGGATCTGGGAAAGGAGTGTGCAGCGCTTTGGCCATCTCTAATGCTATTACTAATTTGTGTGCCACTGTGTTTGGGCAATTGTGGAGACTAGAACCTATACCTTGTGAAAAGAAAGAAATGTGGCGGAGAGAGATGGAATGCCTTCTTAGTGTTAGTGATCACATTGTTGAGTTAATACCTTCTTGGCAAACATTTCCAGATGGAAGTAAGCTTGAGGTAATGACTTGCAGGCCAAGGTCAGATCTTTTCATGAATCTTCCAGCTCTGCGCAAACTTGACAACATGCTTCTTGAAATTTTAGATAGTTGGAAAGATATGGAGTTTTGGTATGTTGACCAAGGAATTGTAGCCCAAGATGCAGATGGATCAGCTTCATTTTACAAAAGAATTCAACGGCAAGAGGATAAGTGGTGGCTCCCAGTACCTCGTATCCCCCCTTCTGGCCTCAGTGAGAACTCAAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGCCAAATACTAAAAGCTTCCATGGCTATCAACAACGGTGCTTTAGCTGAAATGGAAGTTCCTGAGTCATACTTGGAAACCCTTCCTAAGAATGGAAGAAGTTGCTTGGGGGATTTTATTTACCATTACATCACATCAGAGAAATTCTCTCCAGAGTGCCTGCTTGATTGCCTAGACCTCTCCTCTGAACATGTTGCACTAGAGATTGCAAACCGTGTGGAAGCCTCAATATACGTGTGGCGGCGTAGAAGAGCTCACTCTAAACCCCCACCTAATCCTAATCGTTCAACTACAAAGTCATCCTGGGAAATTGTCAAGGACTTCATGGCTGATGGAGATAAGAGAGAGCTATTAGCAGAAAGAGCTGAAAATGTTCTACTTTCATTGAAGCAACGATTCCCGGGTCTAACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCATACTAGAGAGCTATTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTGGCTCGCATAGACGATTTGCTATATGTGGATGGCTTAACTAAACATTCAGATAGGTTTCCACTGGTTCCAATGACAGTGTCTGTCTCAGGCACTCCTCACAAAGCAATTGGCGGCACACCAAGAAAAAGCTTTTCACCTGCACCACCACTAATTAGTCCTGCAAGGGGAGAGAGATCTCCTTTCCTCCGCAACAACCACAACAACATCAAACCTCAATGTCGTGGTTTTGGGGTCAGAAGAGTATTGTCAAATTATCTCGGGGCAGAATCGAAAGAAACTAAGATTGTAAGCAATTCAACTGTGATGAATGGTTCAAACCCAAGCAGCAATAAAGCAGAACAGCCAGAACGTCAAAAGAAGTCACATGCCATGAATGGCAAGACAAACTGA 1683 0.429 METLGNKGENFQKKKDGVPSSASDSTHEAKGCSPPPLGWPIRKATLSKCRKSDEKENEPVSHLEDSKFTTVSSKMSGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFGQLWRLEPIPCEKKEMWRREMECLLSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALRKLDNMLLEILDSWKDMEFWYVDQGIVAQDADGSASFYKRIQRQEDKWWLPVPRIPPSGLSENSRKQLNHTRECASQILKASMAINNGALAEMEVPESYLETLPKNGRSCLGDFIYHYITSEKFSPECLLDCLDLSSEHVALEIANRVEASIYVWRRRRAHSKPPPNPNRSTTKSSWEIVKDFMADGDKRELLAERAENVLLSLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDGLTKHSDRFPLVPMTVSVSGTPHKAIGGTPRKSFSPAPPLISPARGERSPFLRNNHNNIKPQCRGFGVRRVLSNYLGAESKETKIVSNSTVMNGSNPSSNKAEQPERQKKSHAMNGKTN* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0546 560 ProSiteProfiles PRONE domain profile. 68 451 IPR005512 GO:0005085
Gso14g0546 560 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 20 531 - -
Gso14g0546 560 MobiDBLite consensus disorder prediction 1 41 - -
Gso14g0546 560 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 531 IPR038937 GO:0005085
Gso14g0546 560 MobiDBLite consensus disorder prediction 527 560 - -
Gso14g0546 560 Gene3D PRONE domain, subdomain 1 307 450 - -
Gso14g0546 560 Gene3D PRONE domain, subdomain 1 70 306 - -
Gso14g0546 560 MobiDBLite consensus disorder prediction 527 543 - -
Gso14g0546 560 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 78 445 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0546 Gso-Chr14 5217216 5220663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0546 - - gmx:100782311 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0546 14 5217216 5220663 Gso2g2149 2 46133848 46137380 GST
Gso18g0285 18 2564483 2568094 Gso14g0546 14 5217216 5220663 PCT
Gso13g1332 13 28772192 28775815 Gso14g0546 14 5217216 5220663 PCT
Gso14g0546 14 5217216 5220663 Gso18g0285 18 2564483 2568094 PCT
Gso14g0546 14 5217216 5220663 Gso13g1332 13 28772192 28775815 PCT