Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1332 ATGGATGCTTTATCTAAGAAAAACGAAAATTCTTCTCAAAAGAAAAGTGATGGGGTTGTTTTGTCTTGTCTCACCACAGATTATTCTTCCAGTGATACCAGTTTCTGTGGATCCAGTTCTTCAGTTTCTACTGATGAAGCTAAGGCAAAAGGGTCTTCTTCACCTGCTCCTCTTGGTTGGCCTATTCTCAAGGCCACAATCTCCAAGCGCTCTAGTTCTGATGAAAAAGAAAACAGACATAAATCCCACTTGGAAGACAAAAAGTTTACCAGTATTGGCTTGAAGTTGTCAGAACTTGACATGATGAAGGAGAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGCACTGCTTTGGCCATTTCTAATGCCATTACTAATCTCTGCGCAACTGTATTTGGGCAATTATGGAGACTAGAACCTTTACCTTCTGAGAAGAAAGAAATGTGGCAGAGAGAGATGGAATGGCTTGTTAGTGTTAGTGATTACATTGTCGAGTTGATGCCTTCTTGGCAAACATATCCTGATGGGAGTAAGCTCGAGGTAATGACTTGCAGGCCTAGGGCAGATATTTTTATCAATCTTCCAGCTCTCCGCAAACTTGACAACATGCTTCTCGAAATTTTAGACAGTTTCACTGCTACAGAGTTCTGGTATGTAGACCAAGGAATTGTAGCCCCAGATGCAGATGGTTCGGCCTCTTTTCGCAGAACAATTCAGCGGCAAGAAGAGAAGTGGTGGCTTCCCGTGCCTCGTGTCCCCCCTGCAGGACTCAGTGAAGACTCAAGAAAACAGTTGAATCACTCTCGAGAATGTGCAAACCAAATACTAAAAGCAGCCATGGCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCTGAGTCATATTTGGAAGTTCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCGTTACATAACATCAGATCAATTCTCCCCAGAGTGCCTTCTTGATTGCTTAGACATATCCTCTGAACATGTTGCACTAGAGATTGCAAACCGTGTGGAAGCAGCAATTTATGTTTGGCGGCGAAGAGCTCACTCTAGGTCCTCACCAAACCCCAACCGTTCTACCACAAAATCATCATGGGAAATAGTCAAGGACTTCATGATTGATGGAGATAAGAGAGAACTACTAGCAGATAGAGCTGAAAACATTCTAGTTTCCTTGAAGCAGCGTTTCCCAGGCTTAAGTCAAACTACCCTTGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCTGTGCTAGAGAGCTACTCAAGAGTATTGGAGAGCATGGCTTTCAACATTGTGGCCCGCATTGATGATTTGCTGTATGTTGATGACTTGACAAAACATTCAGAGAGGTTTGCATTGGTTCCTACAACTACAGTTAACATGGTTTCTCAGCAGAAGAAGATTACACGTCCACCACTCTCAGTGTCTGTCTCAGGCACTACACCACACAAAGCATCAATTGGCACTCCTAGCTTTTCATCTGCGGCTGTGCCACTAATTAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCCACAACATCAACAACAGCATCAAACCTCATCGTCGCGGCTTTGGGGTGAGGAGAGTGTTGTCAAATTATCTTGGTGTAGAGACAAAGACTACTAAGATATGCAGCAACTCAACTGAGGTGAATTGTTCAAACCCAAGTAGCAAGAAAACCGAACTACAACAACAACCAGAACAACAACGTCAGAAGTTTAAAAACAGGACCAAATGA 1797 0.4318 MDALSKKNENSSQKKSDGVVLSCLTTDYSSSDTSFCGSSSSVSTDEAKAKGSSSPAPLGWPILKATISKRSSSDEKENRHKSHLEDKKFTSIGLKLSELDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKEMWQREMEWLVSVSDYIVELMPSWQTYPDGSKLEVMTCRPRADIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAPDADGSASFRRTIQRQEEKWWLPVPRVPPAGLSEDSRKQLNHSRECANQILKAAMAINSIALAEMEVPESYLEVLPKNGRTCLGDFVYRYITSDQFSPECLLDCLDISSEHVALEIANRVEAAIYVWRRRAHSRSSPNPNRSTTKSSWEIVKDFMIDGDKRELLADRAENILVSLKQRFPGLSQTTLDTSKIQCNKDVGKSVLESYSRVLESMAFNIVARIDDLLYVDDLTKHSERFALVPTTTVNMVSQQKKITRPPLSVSVSGTTPHKASIGTPSFSSAAVPLISPARGERTPFLHNINNSIKPHRRGFGVRRVLSNYLGVETKTTKICSNSTEVNCSNPSSKKTELQQQPEQQRQKFKNRTK* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1332 598 Gene3D PRONE domain, subdomain 1 331 471 - -
Gso13g1332 598 Gene3D PRONE domain, subdomain 1 93 330 - -
Gso13g1332 598 MobiDBLite consensus disorder prediction 566 590 - -
Gso13g1332 598 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 25 569 IPR038937 GO:0005085
Gso13g1332 598 MobiDBLite consensus disorder prediction 28 50 - -
Gso13g1332 598 MobiDBLite consensus disorder prediction 28 56 - -
Gso13g1332 598 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 25 569 - -
Gso13g1332 598 MobiDBLite consensus disorder prediction 566 598 - -
Gso13g1332 598 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 97 465 IPR005512 GO:0005085
Gso13g1332 598 ProSiteProfiles PRONE domain profile. 89 471 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1332 Gso-Chr13 28772192 28775815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1332 - - gmx:100780972 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0285 18 2564483 2568094 Gso13g1332 13 28772192 28775815 GST
Gso13g1332 13 28772192 28775815 Gso14g0546 14 5217216 5220663 PCT
Gso13g1332 13 28772192 28775815 Gso2g2149 2 46133848 46137380 PCT
Gso14g0546 14 5217216 5220663 Gso13g1332 13 28772192 28775815 PCT
Gso2g2149 2 46133848 46137380 Gso13g1332 13 28772192 28775815 PCT