Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0285 ATGGATGCTTTATCTAAGAAGAACGAAAATTCTCAAAAGAAAAGAGATGGGGTTGTTTTGTCTTGTCTCACCACAGATTCTTCCAGTGAAACCAGTTTCTGTGGATCCAGCTCCTCAGTTTCTGCTGAAGAAGCTAAGACAAAAGGGTCTTCTTCACCTGCTCCTCTTGGTTGGCCTATTCTCAAGGCCACAATCTCCAAGCGCTCTAATTCTGATGAAAAAGAAAACAAACATAAATCCCACTTGGAAGACAAAAAGTTTACCAGTATTGCTTTGAAGTTGTCAGAAGTTGACATGATGAAGGAGAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGCACTGCTTTGGCCATCTCTAATGCCATTACTAATCTGTGCGCAACTGTATTTGGGCAATTATGGAGACTAGAACCCTTACCTTCTGAGAAGAAAGAAATGTGGCAGAGAGAGATGGAATGGCTTGTTAGTGTTAGTGATTACATTGTCGAGTTGATGCCTTCTTGGCAAACATATCCTGATGGGAGTAAGCTCGAGGTAATGACTTGCAGGCCTAGGGCAGATATTTTTACCAATCTTCCAGCTCTTCGCAAACTTGACAACATGCTTCTCGGAATTTTAGACAGTTTCACTGCTACAGAGTTTTGGTATGTAGACCAAGGAATTGTAGCCCCAGATGCAGATGGTTCGGTCTCTTTTCGGAAAACAATTCAGCGGCAAGAAGAGAAGTGGTGGCTTCCCGTACCTCGTGTTCCCCCTGCAGGACTCGGTGAAGACTCAAGAAAACAGTTGAATCACTCTCGAGAATGTGCAAACCAAATACTAAAAGCAGCCATGGCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCTGAGTCATATTTGGAAGTTCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCGTTACATAACATCAGATCAATTCTCCCCGGAGTGCCTTCTTGATTGCTTAGACATATCCTCTGAACATGTTGCACTAGAGATTGCAAACCGTGTGGAAGCAGCAATTTATGTATGGCGCCGAAGAGCTCACTCTAGGTCCTCACCAAACCCCAACCGTTCTACCACAAAATCATCATGGGAAATAGTCAAGGACTTCATGGTTGACGGAGATAAGAGAGAACTACTAGCAGATAGAGCTGAGAACATTCTAGTTTCCTTGAAGCAGCGGTTCCCAGGCTTAAGTCAAACTACCCTTGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCGTGCTAGAGAGCTACTCAAGAGTTTTGGAGAGCATGGCTTTTAACATTGTGGCCCGCATTGATGATTTGCTATATGTGGATGACTTGACAAAACATTCAGAGAGGTTTGCATTGGTTCCTACCACTACAGTTAACGTGGTTTCTCAGCAAAAGAAGGTTACACGTCCACTCTCAGTGTCTGTCTCAGGCACTACTCCACACAAAGCATCAGTTGGCACACCTAGCTTTTCACCTGCGGCGGTGCCACTAATAAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCCACAACATCAACATCAACAACAACAACAACATCAAACCCCATCGTCGCGGCTTTGGGGTGAGGAGAGTGTTGTCAAATTATCTTGGAGTAGAGACAAAGACTACTAAGATATGCAGCAACTCAACTGAGGTGAATTGTTCAAACCCAAGCAGCAAGAAAACGGAACAACAACATCAGAAGGTGAAAAACAGGACCAAATGA 1782 0.4383 MDALSKKNENSQKKRDGVVLSCLTTDSSSETSFCGSSSSVSAEEAKTKGSSSPAPLGWPILKATISKRSNSDEKENKHKSHLEDKKFTSIALKLSEVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKEMWQREMEWLVSVSDYIVELMPSWQTYPDGSKLEVMTCRPRADIFTNLPALRKLDNMLLGILDSFTATEFWYVDQGIVAPDADGSVSFRKTIQRQEEKWWLPVPRVPPAGLGEDSRKQLNHSRECANQILKAAMAINSIALAEMEVPESYLEVLPKNGRTCLGDFVYRYITSDQFSPECLLDCLDISSEHVALEIANRVEAAIYVWRRRAHSRSSPNPNRSTTKSSWEIVKDFMVDGDKRELLADRAENILVSLKQRFPGLSQTTLDTSKIQCNKDVGKSVLESYSRVLESMAFNIVARIDDLLYVDDLTKHSERFALVPTTTVNVVSQQKKVTRPLSVSVSGTTPHKASVGTPSFSPAAVPLISPARGERTPFLHNININNNNNIKPHRRGFGVRRVLSNYLGVETKTTKICSNSTEVNCSNPSSKKTEQQHQKVKNRTK* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0285 593 Gene3D PRONE domain, subdomain 1 330 469 - -
Gso18g0285 593 Gene3D PRONE domain, subdomain 1 90 329 - -
Gso18g0285 593 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 95 463 IPR005512 GO:0005085
Gso18g0285 593 MobiDBLite consensus disorder prediction 568 593 - -
Gso18g0285 593 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 15 568 IPR038937 GO:0005085
Gso18g0285 593 MobiDBLite consensus disorder prediction 24 58 - -
Gso18g0285 593 ProSiteProfiles PRONE domain profile. 87 469 IPR005512 GO:0005085
Gso18g0285 593 MobiDBLite consensus disorder prediction 24 48 - -
Gso18g0285 593 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 15 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0285 Gso-Chr18 2564483 2568094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0285 - - gmx:100796692 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0285 18 2564483 2568094 Gso18g0285 18 2564483 2568094 ECH
Gso18g0285 18 2564483 2568094 Gso13g1332 13 28772192 28775815 GST
Gso18g0285 18 2564483 2568094 Gso14g0546 14 5217216 5220663 PCT
Gso18g0285 18 2564483 2568094 Gso2g2149 2 46133848 46137380 PCT
Gso14g0546 14 5217216 5220663 Gso18g0285 18 2564483 2568094 PCT
Gso2g2149 2 46133848 46137380 Gso18g0285 18 2564483 2568094 PCT