Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2119 ATGCCTTTCATTTCCAAAATTCAGCGTCAATCCGATTACAACCTCTTCGATTCCAACACTCCTCTTGTGATAGACAATGGCGCCTCGTATTTTCGCATAGGGTGGGCGGGAGAGTCTGAACCTCGTGTTGTTTTTCGCAACCTTGTGCAAAGGCCGCGCCATAAAGTAACTGGAGAAACTGTCACTATTGTGGGTGACCATGATCCAGCATTACTGAAATACTTTGACTGCACTCGCTCAGGGCCACGCTCTGCATTTGACAGCAATGTTGTGTACCAGTTTGAAACAATGGAATATATTCTTGATTTTGGATTTGACCGGATGGGTGCAAATGGAACAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTATGCAACCCGGTTCAATCTCGTAGCAAAATGGCAGAACTTCTTTTTGAGACTTATGGAGTTCCATCAATTGCTTTTGGTGTTGATGTGGCATTCAGCTATAAATATAATCAACAGCAAGGAGTTTGTGCTAAAGATTGTCTTGCTTTGTGTCCTGGATTCAACACAACCCATGTGATTCCGTTTGTAGATGGGGAGCCTGTTTACGAAGGATGCTGTCGTACTAATGTTGGTGGATTCCATGTGACTGATCATTTGAAGCAACTCCTTTCACTTAAATACCCTTATCATTTGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACCAGATTATGTTTCCGAAGTTCGGTTGTTTCAGAAAGGAGCCAAGGAAGCTGAAGAAAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCACCCCCAATTGAGGAGCCTCCTTCCGAGGAAGAGATTGCAAGAAAGGCAGCAATAAAAGAGAAACAAGGTCAAAGGCTTCGAGAAATGGCTGAGGCAAAGAGGTCTTCTAAGATAAATGAACTGGAAAATGAATTGCATGGTTTAGAGTTTCTTTTTCATCAGCTTGAACAAGTGGAAGAGAGCAAGGTTCTATCTTTCCTGGCCGAAACTGGCTATGGCTCTAGGCAGGAGATAGAATCTGCACGTAATAAAGTTATGCAATCTTTACGGAAAGCAAAAGGTGAACCAAAGAATGAACAAGATGAAACTGAAAAGGTTGATCCTGCCGCTAATGAGAAGTATTCTCTTATTAACATTCCTGATGACATGCTGACCCAAGAACAGCTCAATGAAAAGAAGAAACAGTTGTCACTCAAATCTATGGCTGAAGGGAGGCAGCGATTAAAACAGAAGCGCCATGAAGAGGAATTGGAACGAGAGAGAAAACAACAGCTAGAGGAGGAGAAACGCCTGGAGAACCCAGAGCTTTACTTGGAACAACTGCATGCTAGATACAAAGACCTTTCAGAGAGACTTGACCAACAAAAGCGACTTAAGACAAACGGAGGCCATTCTAATGGAAATAATCTGTCCGGTGGTGTTGGCCGTGGTGAAAGACTAAATGCTGCTCAGAGAGAACGAATGCGTCTCCTGACAACTGCAGCTTTTGATCGTGGTAAGGGTGAGGATACATTTGGTGCCAGAGATGAAGATTGGCAACTATACAAATTGATGAGCAAAGATTATAATGATGATGATGAGGGACCTGATGAGGAAGAGGCAGAGCTGGCCTGCATCTCTTCCAGGCTCCAGGACTTGGATCCAACATTTATACCCAAGTTAGAAGCTGGTATCTCCCAACCTGCTGAGTTGCCACATGTTCGACCTCTGACCAAAGAAGATTTTCAGATTTTTCTTGGGGTCGAAAGATTCAGATGTCCTGAACTATTGTTTAATCCAAACTGGATTGCGGTTGATCAGGTAGGATTAGATGAGATGGTTGGGGTTTCAATAAGGAGGTTACCATACAAGGATGAAAGCTTGGAACAGAGACTGACTAGTTCCATACTTGTTACTGGTGGAAGTTCTCTTTTCCCCGGTATAGTTGAACGCCTGGAAGCTGGAATTCGGATGATTAGACCTTGTGGCACACCTATAAAAATAGTTAGAGCACTGGATCCAGTAATGGATGCATGGAGAGGGGCTGCTTCATTTGCCTCGGACCCACAGTTCCATATGCAAACTTTCAGTAGACTGGATTATTATGAAAAAGGTGAAGACTGGCTTCGAAATTATCAACTGCAATATACATTGTAA 2169 0.4325 MPFISKIQRQSDYNLFDSNTPLVIDNGASYFRIGWAGESEPRVVFRNLVQRPRHKVTGETVTIVGDHDPALLKYFDCTRSGPRSAFDSNVVYQFETMEYILDFGFDRMGANGTEIDHPVLITECVCNPVQSRSKMAELLFETYGVPSIAFGVDVAFSYKYNQQQGVCAKDCLALCPGFNTTHVIPFVDGEPVYEGCCRTNVGGFHVTDHLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIAPDYVSEVRLFQKGAKEAEEKTRCWQLPWVPPPIEEPPSEEEIARKAAIKEKQGQRLREMAEAKRSSKINELENELHGLEFLFHQLEQVEESKVLSFLAETGYGSRQEIESARNKVMQSLRKAKGEPKNEQDETEKVDPAANEKYSLINIPDDMLTQEQLNEKKKQLSLKSMAEGRQRLKQKRHEEELERERKQQLEEEKRLENPELYLEQLHARYKDLSERLDQQKRLKTNGGHSNGNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWQLYKLMSKDYNDDDEGPDEEEAELACISSRLQDLDPTFIPKLEAGISQPAELPHVRPLTKEDFQIFLGVERFRCPELLFNPNWIAVDQVGLDEMVGVSIRRLPYKDESLEQRLTSSILVTGGSSLFPGIVERLEAGIRMIRPCGTPIKIVRALDPVMDAWRGAASFASDPQFHMQTFSRLDYYEKGEDWLRNYQLQYTL* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2119 722 Coils Coil 409 445 - -
Gso2g2119 722 Gene3D - 612 681 - -
Gso2g2119 722 Gene3D - 177 202 - -
Gso2g2119 722 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Gso2g2119 722 SUPERFAMILY Actin-like ATPase domain 170 715 IPR043129 -
Gso2g2119 722 SUPERFAMILY Actin-like ATPase domain 17 158 IPR043129 -
Gso2g2119 722 MobiDBLite consensus disorder prediction 404 439 - -
Gso2g2119 722 Pfam Actin 17 268 IPR004000 -
Gso2g2119 722 Pfam Actin 587 714 IPR004000 -
Gso2g2119 722 PANTHER ACTIN 15 714 IPR004000 -
Gso2g2119 722 Gene3D Actin; Chain A, domain 4 584 611 - -
Gso2g2119 722 SMART actin_3 19 719 IPR004000 -
Gso2g2119 722 Coils Coil 449 469 - -
Gso2g2119 722 MobiDBLite consensus disorder prediction 358 383 - -
Gso2g2119 722 Coils Coil 309 329 - -
Gso2g2119 722 PANTHER ACTIN-RELATED PROTEIN 5 15 714 IPR027664 -
Gso2g2119 722 MobiDBLite consensus disorder prediction 358 380 - -
Gso2g2119 722 Gene3D - 682 710 - -
Gso2g2119 722 Gene3D - 16 170 - -
Gso2g2119 722 Gene3D Actin; Chain A, domain 4 203 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2119 Gso-Chr2 45769953 45775821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2119 490 709 Miscellaneous Gene Families AT2G42100 27.354 1.97e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2119 K11672 - gmx:100804305 1368.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0581 14 5669094 5673568 Gso2g2119 2 45769953 45775821 GST
Gso18g0328 18 3089224 3094888 Gso2g2119 2 45769953 45775821 PCT
Gso13g1287 13 28213801 28219855 Gso2g2119 2 45769953 45775821 PCT
Gso2g2119 2 45769953 45775821 Gso18g0328 18 3089224 3094888 PCT
Gso2g2119 2 45769953 45775821 Gso13g1287 13 28213801 28219855 PCT