Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0581 ATGCCTTTCATTTCCAAAATTCAGCGTCAATCTGATTTCAACCTCTTCGATTCCAACACTCCTCTCGTGATAGACAATGGCGCCTCGTATTTTCGCATAGGGTGGGCGGGAGAGTCTGAACCTCGTGTTGTTTTTCGCCACATTGTGCAAAGGCCGTGCCATAAAGAAACCGGGGAAACTGTCACTATTGTGGGTGACCATGATCCGGCATTTCTGAAATACTTTGACTGCACTCACTCAGGGCCACACTCTGCATTTGATAGCAATGTTGTGTACCAGTTTGAAACAATGCAATATATTCTAGATTTTGGATTTGATCGGATGGGTGCAAATGGAACAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTATGCAACCCGGTTCAATCTCGTAGTAAAATGGCAGAACTTCTTTTTGAGACTTATGGAGTTCCATCAATTGCCTTTGGTGTTGATGTGGCATTCAGCTATAAATATAATCAACAGCGAGGAGTTTGTGCTAAAGATTGTCTTGCTTTGTGTCCTGGATTCAACACAACCCATGTGATTCCGTTTGTAGATGGGGAGCCTGTTTACGAAGGATGCTGTCGTACTAATATTGGTGGATTCCATGTGACTGATCATTTGAAGCAACTCCTTTCACTTAAATATCCTTATCATTTGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACCAGATTATGTTTCTGAAGCTCGGTTGTTTCAGAAAGGAGCCAAGGAAGCTGAAGAAAAAACCAGATATTGGCAGATTCCTTGGGTTCCACCCCCAATTGAGGAGCCTCCTTCCGAGGAAGAGATTGCAAGAAAGGCAGCAATAAAAGAGAAACAAGGTCAAAGTCTTCGAGAAATGGCTGAGGCAAAGAGGTCTTCTGAGATAAATGAACTGGAAAATGAATTGCATGGTTTAGAGTTTCTTTGGCATCAGCTTGAACAAGTGGAAGAGAGCAAGGTTCCATCTTTCCTGGCAGAAACTGGCTATGGCTCTAGGCAGGAGATTGAATCTGCACGTAATATAGTTATGCAATCTTTACAGAAAGCAAAAGGTGAACCAAAGAATGAACAAGATGCAACTGAAAAGGTTGATCCTGCCACCAATGATTCTCTTATTAACATTCCTGATGAGGTGCCACATGCTCGACCTCTGACCAAAGAAGATTTTCAGATTGTTCTTGGGGTCGAAAGGTTCCGATGTCCTGAACTATTGTTTAATCCAAACTGGATTGCGGTTGATCAGGTAGGATTAGATGAGATGGTTGGGGTTTCAATAAGGAGGTTGCCATACAAGGATGAAAGCTTGGAAGAGAGACTGACTAGTTCCATACTTGTTACTGGTGGAAGTTCTCTTTTCCCCGGTATAATTGAACGCCTGGAAGTTGGAATTCGGATGATTAGACCTTGTGGCACACCTATAAAAATAGTTAGAGCACTGGATCCAGTAATGGATGCATGGAGAGGGGCTGCTTCATTTGCCTCGGACCCACAGTTCCATCAGCAAACTTTTAGTATACTGGATTATCATGAAAAAGGAGAAGACTGGCTTCGCAATTATCAACTGCAGTATACTTTGTAA 1620 0.4253 MPFISKIQRQSDFNLFDSNTPLVIDNGASYFRIGWAGESEPRVVFRHIVQRPCHKETGETVTIVGDHDPAFLKYFDCTHSGPHSAFDSNVVYQFETMQYILDFGFDRMGANGTEIDHPVLITECVCNPVQSRSKMAELLFETYGVPSIAFGVDVAFSYKYNQQRGVCAKDCLALCPGFNTTHVIPFVDGEPVYEGCCRTNIGGFHVTDHLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIAPDYVSEARLFQKGAKEAEEKTRYWQIPWVPPPIEEPPSEEEIARKAAIKEKQGQSLREMAEAKRSSEINELENELHGLEFLWHQLEQVEESKVPSFLAETGYGSRQEIESARNIVMQSLQKAKGEPKNEQDATEKVDPATNDSLINIPDEVPHARPLTKEDFQIVLGVERFRCPELLFNPNWIAVDQVGLDEMVGVSIRRLPYKDESLEERLTSSILVTGGSSLFPGIIERLEVGIRMIRPCGTPIKIVRALDPVMDAWRGAASFASDPQFHQQTFSILDYHEKGEDWLRNYQLQYTL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0581 539 Gene3D - 405 494 - -
Gso14g0581 539 MobiDBLite consensus disorder prediction 360 390 - -
Gso14g0581 539 PANTHER ACTIN-RELATED PROTEIN 5 18 531 IPR027664 -
Gso14g0581 539 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Gso14g0581 539 Pfam Actin 17 531 IPR004000 -
Gso14g0581 539 SMART actin_3 19 536 IPR004000 -
Gso14g0581 539 Gene3D - 16 170 - -
Gso14g0581 539 Gene3D Actin; Chain A, domain 4 201 314 - -
Gso14g0581 539 SUPERFAMILY Actin-like ATPase domain 17 158 IPR043129 -
Gso14g0581 539 SUPERFAMILY Actin-like ATPase domain 170 532 IPR043129 -
Gso14g0581 539 PANTHER ACTIN 18 531 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0581 Gso-Chr14 5669094 5673568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0581 372 526 Miscellaneous Gene Families AT2G42100 29.677 2.90e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0581 K11672 - gmx:100790295 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0581 14 5669094 5673568 Gso2g2119 2 45769953 45775821 GST
Gso18g0328 18 3089224 3094888 Gso14g0581 14 5669094 5673568 PCT
Gso13g1287 13 28213801 28219855 Gso14g0581 14 5669094 5673568 PCT
Gso14g0581 14 5669094 5673568 Gso18g0328 18 3089224 3094888 PCT
Gso14g0581 14 5669094 5673568 Gso13g1287 13 28213801 28219855 PCT