Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2116 ATGGCTCACTGTTCTAACAAGGATAATGACCCAAGTGCATCTCAATTAAGTTGGTGGTATGTAGATATATCTTATCAAGAACTAAAAAAGGGAAGTTACAAAGTGATGCGCTCAGATGAAACTTTCATTTGTCCGTACTGTCCTGAGAGAAAACAGGATTATAAGTACAGGGAACTCCTTAATCATGCTTCTGGGGTGGGTCGGAGTAGTTCAGAAAAGAGAACTGCAAAAGAGAAGGCTAATCATCTGGCTTTAGTGAAATATTTGGAAAAGGATCTTGTACATATGGATGTCCCATCAAAACCTGTAGATAAAGGTGCCAAATTATTAAGCCCAGGAGAAACCATAATGCCTCACTGTTCAAACAAGGACACTGATATAAGTGCATCTCAAATAAGTTGGTGGTATGTGGATACATCTTACGAAGAACTCAAAAACAGAAGCCACAATGTGAAAACCTCAGATGTGACTTTCATCTGTCCATACTGCCCTAGGAGAAAACAGGATTATTTGTACAGGGAACTCCTAGAACATGCTTATATGGTGGGTCGGAGTAGTTCTGAAAAGAGAAGTGCCAGAGAGAGGGCCAATCATCTCGCTTTAGTGAAATATTTGGAAAATGATCTTATTATTATGGATGGCCCGCCAGAACCTGTAGATAAAGGTACCAAATTAAGCCTAGGACAAACTGTAGAGGCTCAATGCTCTAACAAGGAGACTGGTATGAGTGCATCTCCAATAAATTGGTGGTATGTAGATAAATTTTACAAAGAACTCAAAAAGGGAAATCACATTGTGCAAACCTCAGATCAGACTCTCTCTTGTCCATACTGCCCTAGAAAAAGAAAACGGGATTATGTGTACAGGGAACTTCTTGAGCATGCTTCTGGGGTGGGTCAGAGTAGTTCACAAAAGAGACATGTCAGAGAGAAGACCACTCATCTGGCTTTAATGAAATATTTGAAAAATGATCTCAAGTATATGAATGATCCATCAAAATCTGTGAATGAATGTAACCCCCCAGTTAACAGGGGGGATCAGAGCAGTTCACAAGAGAGAAGTGTCAGAGAAGACGCTACTCATCTGCCTTCAGTGAAATACTTGAAAAAGGATCTTACAAATGTGAGTGGTCCATCATCAAAACCTGTAAATGAAGGAACCATAACAGTAAGCCCAGGAGAAACTGTAATTGGTTGCTGCTCTAACAAAGATAGTAATATAAGTTCATCTCAAATTGTGTGGTATGCAGAAAATTTTTATGAAGAACTCAAAAGGGGGATACACAATGTGAAAACCTCAGATGAGACTTTCAGGTGCCCATACTGCCCTAATAAAAAGATAAACCGGGATTATGCGTACAGGGAAATCCTTGAACATGCTTCGGGGGTGGGTCAGAGTAAGTCTCAAAAAAGAAGTTTCATCGAAAAGGCCAATCATCTGGCTTTAGTAAAATATTTGAAAAGGGATCTTATGAATGTGGGTGCTCCATGTCCATCAAAACCTATGGATCAAGGCACCAAAACAATAAGCCCAGGAGAAACTTTAATGGGTCAATACTCTCATAAAGACAATAATATAAGGGAATCTCAAATAAGTGGGTGGTATGTACATAAATCCTATGAAGCACTCAAAAAGGGAAGCCACAACGTGAAAACCTCAGAAATGACTTTCTCTTGTCCATACTGCCCCAATAAGAAGAGAAAACGTGATTATCTGTACAGGGAAATCCTTGAACATGCTTCCGGGGTGGGTCAGAGTAGCTCAGAAAAGAGAAGTGCCATTGAAAAGGCTAATCATCTTGCTTTAATAAAATATTTGGAAAAAGATCTTATGATTGTGGATGGTCCACCAAAAACTGCAGATGAAGGCAGTCCTCCTTTCAATTTTGAGAAGCAGTTTGTGTGGCCATGGACTGGGGTTGTGGTTAATATTCCTACTAGACTGACAGAGGACGGACGTTGTGTTGGGGAAAGTGGTTCCAAGCTGAGGGATGAATACCGAAGTAGGGGATTTAATCCAAGAAGAGTCCGCATTCTTTCAAATTTCTGTGTCCACTCTGGAACTGCAGTTGTGGAATTCAATAAAAATTGGACAGGGTTAGATAATGCTTTAGCATTTGAAAGAGCATATGAATTAGATCATCATGGGAAAAAAGACTGGTTTGCTAATACACAGCATAAGTCTGGTATTTATGCATGGATTGCTCAAGCTGATGACTACAAGATGAACAATATCATTGGGGAACAACTGCGGAAGATGGTGGATATCAAAACAATATCTGAACTTATGGAAGAAGAAGCTCGGACGCAGGATAAACTTGTGTCCAACTTGAATAACACTCTTCAGGTCAAGAAGAAGCGATTAAAGGAAATGGAAGTAAAATATTATGAGACTTCACGTCGTATGGACATTGTAATGGGGGAAATAGATAAGCTCACTCAAGGTCACAATCAAGAGATGAAGAAAATACAGTCAAGTGCAACTCAACACTTCCAGAATATTTTTAATGGTCATGAAAGGCTTAAGTTGCAACTAGAATCTCAGAAAAGAGAGCTTGAGTTGCGGAGAATTGAATTGGAAAAACGTGAGGCACGTAACGAAAGTGAAAGAAAAAAGTTGGAAGAAGAGATTATGGAGAATGCATTGAAAAATAGCTCTCTTGACATGGCTGTTCTGGAGCAACAGAAAGCTGGTGAAAATGTTTTGAAACTGGCTGCAGATCAAAAGCGGCAAAAAGAACAATTTCATGCTAAAATAATCCTGCTTGAAAGACAACTGGAAGTGAAACAAAAACTAGAATTGGAGATTCAACAACTGAAAGGAAAATTAAATGTCATGGCGCACATAGAAGATGATGGGGACTCAGAAGTTTTGAATAAGGTGGATGCTTTACATAAGGATTTAAGAGAAAAGGAACAGTCACTACGAGACTTGGATTCCCTGAACCAAACACTGATTATTAAAGAGCGTCAGAGCAATGATGAGCTACAGGAAGCTCGAAAAGAATTGATTAATGGCATTAAAGAGATATCTTGTCGTGCTAATGTTGGTGTGAAGAGAATGGGGGAGCTTGATATTAGACCATTCCTTGAAGCTATGAAGATAAAATATAATAATGAGGATGCAGAAGATAGAGCTTCAGAACTGTGTTCGTTGTGGGAAGAGTATATAAGGGACCCAGACTGGCATCCATTTAAAATTACCATAATTGAAGGGAAACATCAGGAAATCATAGATGATGAAGATGAAAAGTTGAAGGGACTGAAAAATGAGATGGGTGAAGGAGTCTACAAAGCTGTGGTGACAGCTTTGACAGAGATAAATACATATAATCCAAGTGGGCGGTATATAACCTCTGAATTATGGAATTACGAAGAGGGAAAAAGAGCTACCTTGCAAGAAGGAGTAAAATTGTTATTGATGCAATGGAAACTAACTAAACAAAAAAGGGGGACAATGTGA 3462 0.3911 MAHCSNKDNDPSASQLSWWYVDISYQELKKGSYKVMRSDETFICPYCPERKQDYKYRELLNHASGVGRSSSEKRTAKEKANHLALVKYLEKDLVHMDVPSKPVDKGAKLLSPGETIMPHCSNKDTDISASQISWWYVDTSYEELKNRSHNVKTSDVTFICPYCPRRKQDYLYRELLEHAYMVGRSSSEKRSARERANHLALVKYLENDLIIMDGPPEPVDKGTKLSLGQTVEAQCSNKETGMSASPINWWYVDKFYKELKKGNHIVQTSDQTLSCPYCPRKRKRDYVYRELLEHASGVGQSSSQKRHVREKTTHLALMKYLKNDLKYMNDPSKSVNECNPPVNRGDQSSSQERSVREDATHLPSVKYLKKDLTNVSGPSSKPVNEGTITVSPGETVIGCCSNKDSNISSSQIVWYAENFYEELKRGIHNVKTSDETFRCPYCPNKKINRDYAYREILEHASGVGQSKSQKRSFIEKANHLALVKYLKRDLMNVGAPCPSKPMDQGTKTISPGETLMGQYSHKDNNIRESQISGWYVHKSYEALKKGSHNVKTSEMTFSCPYCPNKKRKRDYLYREILEHASGVGQSSSEKRSAIEKANHLALIKYLEKDLMIVDGPPKTADEGSPPFNFEKQFVWPWTGVVVNIPTRLTEDGRCVGESGSKLRDEYRSRGFNPRRVRILSNFCVHSGTAVVEFNKNWTGLDNALAFERAYELDHHGKKDWFANTQHKSGIYAWIAQADDYKMNNIIGEQLRKMVDIKTISELMEEEARTQDKLVSNLNNTLQVKKKRLKEMEVKYYETSRRMDIVMGEIDKLTQGHNQEMKKIQSSATQHFQNIFNGHERLKLQLESQKRELELRRIELEKREARNESERKKLEEEIMENALKNSSLDMAVLEQQKAGENVLKLAADQKRQKEQFHAKIILLERQLEVKQKLELEIQQLKGKLNVMAHIEDDGDSEVLNKVDALHKDLREKEQSLRDLDSLNQTLIIKERQSNDELQEARKELINGIKEISCRANVGVKRMGELDIRPFLEAMKIKYNNEDAEDRASELCSLWEEYIRDPDWHPFKITIIEGKHQEIIDDEDEKLKGLKNEMGEGVYKAVVTALTEINTYNPSGRYITSELWNYEEGKRATLQEGVKLLLMQWKLTKQKRGTM* 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2116 1153 Coils Coil 922 949 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 516 565 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 347 386 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 117 167 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 281 344 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 51 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 448 507 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 566 1153 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 50 108 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 233 280 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 400 446 - -
Gso2g2116 1153 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 166 223 - -
Gso2g2116 1153 Pfam XS zinc finger domain 160 202 IPR005381 GO:0031047
Gso2g2116 1153 Pfam XS zinc finger domain 275 317 IPR005381 GO:0031047
Gso2g2116 1153 Pfam XS zinc finger domain 44 86 IPR005381 GO:0031047
Gso2g2116 1153 Pfam XS zinc finger domain 439 483 IPR005381 GO:0031047
Gso2g2116 1153 Pfam XS zinc finger domain 559 602 IPR005381 GO:0031047
Gso2g2116 1153 Pfam XS domain 630 741 IPR005380 GO:0031047
Gso2g2116 1153 Gene3D XS domain 627 795 IPR038588 -
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 448 507 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 1 51 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 281 344 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 516 565 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 166 223 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 233 280 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 400 446 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 566 1153 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 50 108 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 347 386 IPR045177 GO:0080188
Gso2g2116 1153 PANTHER RIBONUCLEASE P SUBUNIT P38 117 167 IPR045177 GO:0080188
Gso2g2116 1153 Pfam XH domain 1019 1149 IPR005379 -
Gso2g2116 1153 CDD RRM_like_XS 633 740 IPR005380 GO:0031047
Gso2g2116 1153 Coils Coil 774 794 - -
Gso2g2116 1153 Coils Coil 961 1013 - -
Gso2g2116 1153 MobiDBLite consensus disorder prediction 331 361 - -
Gso2g2116 1153 Coils Coil 835 881 - -
Gso2g2116 1153 MobiDBLite consensus disorder prediction 331 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2116 Gso-Chr2 45744363 45752419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2116 - - gmx:100806426 2328.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0584 14 5695174 5704479 Gso2g2116 2 45744363 45752419 GST
Gso18g0334 18 3156854 3171831 Gso2g2116 2 45744363 45752419 PCT
Gso13g1283 13 28142442 28149984 Gso2g2116 2 45744363 45752419 PCT
Gso2g2116 2 45744363 45752419 Gso18g0334 18 3156854 3171831 PCT
Gso2g2116 2 45744363 45752419 Gso13g1283 13 28142442 28149984 PCT