Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0584 ATGGCTCACTGTTCTAACAAGGATAATGACCCAAGTGCATCTCAATTAAGTTGGTGGTATGTAGATATATCTTATCAAGAACTAAAAAAGGGAAGTTACAAAGTGATGCGCTCAGATGAAACTTTCATTTGTCCGTACTGTCCCGAGAGAAAACAGGATTATAAGTACAGGGAACTCCTTAATCATGCTTCTGGGGTGGGTCGGAGTAGTTCAGAAAAGAGATCTGCAAAAGAGAAGGCTAATCATCTGGCTTTAGTGAAATATTTGGAAAAGGATCTTGCGTATATGGATGGCCCATCAAAACCTGTAGATAAAGGTGCCAAATTATTAAGCCCAGGAGAAACCGTAATGCCTCACTGTTCTAATAAGGATACTGATATAAGTGCATCTCAAATAAGTTGGTGGTATGTTGATACATCTTACGAAGAACTCAAAAAGGGAAGCCACAGTGTGAAAACCTCGGACGTGACTTTCATCTGTCCATACTGCCCTAGGAGAAAACAGGATTATTTGTACAGGGAACTCCTAGAACATGCTTATATGGTGGGTCGGAGTAGTTCTGAAAAGAGAAGTGCGAGAGAGAGGGCCAATCATCTTGCTTTAGTGAAATATTTGGAAAATGATCTTATTATTATTATGGATGGCCCGTCAGAACCTGTGGATAAAGGTACTAAATTAAGCCTAGGACAAACTGTAGTGGCTCAATGCTCTAACAAGGAGACTGGTATGAGTGCATCTCCAATAAATTGGTGGTATGTAGAGAAATTTTACAAAGAACTCAAAAAGGGAAATCACATGGTGCAAACCTCAGATCTGACTCTCTGTTGTCCATACTGCCCTAAAAAAAGAAAACAGGATTATGTGTACAGGGAACTTCTTGAGCATGCTTCTGGGGTGGGCCAGAGTAGTTCAGAAAAGAGACATGTCAGAGAGAAGGCCACTCATCTGGCTTTAATGAAATATTTGAAAAATGATCTCAAGTATTTGAATGATCCATCAAAATCTGTGAATGAAGGTAACCCCCCCGTTAACAGGGTGCATCAGATTAGTTCACAAGAGAGAAGTGTCAGAGAAGACGCTACTCATCTGCCTTCAGCGAAATACTTCAAAAAGGATCTTACAAATGTGAGTGATCCATCATCAAAACCTGTAAATGAAGGAACCATAACAGGAAGCCCAGGAGAAACTGTAATTGGTTGCTGCTCTAACAAAGATAGTAATATAAGTTCATCTCAAATTGGGCGGTATGCAGAAAAATTTTATGAAGAACTCAAAAGGGGGATACACAATGTGAAAACCTCAGATGAGACTTTCAGGTGCCCATACTGCTCTAATAAAAAGATAAATCGGGATTATGTTTACAGGGAAATCCTTGAACATGCTTCAGGGGTGGGTCAGAGTAAATCTCAAAAAAGAAGTTTCATCGAAAAGGCCAATCATCTGGCTTTAGTAAAATATTTGAAAAAGGATCTTATGAATGTGGGTGCTCCGTGTCCATCAAAACCTATGGATCAAGGTACCAAAACAATAAGCCCAGGAGAAACTGTAATGGGTCACTACTCTCATAATGACAATAATATAAGGGCATCTCAAATAAGTGGGTGGTATGTACATAAATCCTATGAAGCACTCAAAAAGGGAAGCCACAATGTGAAAACCTCAGAAATGACTTTCTCTTGTCCATACTGCCCCAATAAGAAGAGAAAACGGGATTATGTGTACAGGGAAATCCTTGAACATGCTTCTGGGGTGGGTCAGAGTAGCTCAGAAAAGAGAAGTGCCATTGAAAAGGCTAATCATCTTGCTTTAATGAAATATTTGGAAAAGGATCTTATGATTGTGGATGGTCCACCAAAAACTGCAGATGAAGGCAGTCCTCCTTTCAATTTTGAGAAGCAGTTTGTGTGGCCATGGACTGGGATCGTGGTTAATATTCCTACTAGACTGACAGAAGAGGGATGTTGTGTTGGGGAAAGTGGTTCCAAGCTGAGGGATGAATACCGAAGTAGGGGATTTAATCCACAAAGAGTCCGCATTCTTTCAAATTTCTGTGGTCATTCTGGAACTGCAGTTGTGGAATTCAATAAAAATTGGACAGGCTTAGATAATGCTTTAGCATTTGAAAGAGCATATGAATTAGATCATCATGGGAAAAAAGACTGGTTTGCTAATACAGAGCATAAGTCTGGTATTTATGCATGGATTGCTCGAGCTGACGACTACAAGGTAAACAATATCATTGGGGAACAACTGCAGAAGATGGGGGATATCAAAACAATATCTGAACTTATGGAAGAAGAAGCTCGAATGCAGGATAAACTTTTGTCCAGCTTGAATAATACTCTTCAGGTCAAGAAGAAGCGATTAAAGGAGATGGAAGTAAAATATTATGAGACTTCACATCGTATGGACATTGTAATGGGGGAAATAGATAAGCTCACTCAAGGTCACAATCAAGAGATGAAGAAAATACAGTCAAGTGCAACTCAACACTTCCAGAATATTTTTAATGGTCATGAAAGGCTTAAGTTGCAACTTGAATCTCAGAAAAGGGAGCTTGAGTTGAGGAGAATTGAATTGGAAAAACGTGAGGCACGTAACGAAAGTGAAAGAAAAAAGTTGGAAGAAGAGATTATGGAGAATGCATTGAAAAATAGCTCTCTTGACATGGCTGTTCTGGAGCAACAAAAAGCTGGTGAAAATGTTTTGAAACTGGCTGCAGATCAAAAGCGGCAAAAAGAACAATTTCATGCTAAAATCATCCTGCTTGAAAGACAACTGGAAGTGAAACAAAAACTAGAATTGGAGATTCAACAACTGAAAGGAAAATTAAATGTCATGGCGTACATAGAAGATGATGGGGACACAGAAGTTCTGAATAAGGTGGATGCTTTACATAAGGATTTAAGAGAAAAGGAACAGTCACTGCGAGACTTGGATTCCCTGAACCAAACACTGATTATTAAAGAGCGTCAGAGCAATGATGAGCTACAGGAAGCTCGAAAAGAATTGATTAATGGCATTAAAGAGATATCTTGTCGTGCTAATGTTGGTGTAAAGAGAATGGGGGAGCTTGATATTAGACCATTCCTTGAAGCTATGAAGAAAAAATATAATGATGAGGATGCAGAAGATAGAGCTTCAGAACTGTGTTCGTTGTGGGAAGAGTATATAAAGGACCCAGACTGGCATCCATTTAAAATTACCATGATTGAAGGGAAACATCAGGAAATCATAGATGATGATGATGAAAAGTTGAAGGGACTGAAAAATGAGATGGGTGAAGGAGTCTACAAAGCTGTGGTGACAGCTTTGACAGAGATAAATACATATAATCCAAGTGGGCGGTATATAACCTCTGAATTATGGAATTATGAAGAGGGAAAGAGAGCTACCTTGCAAGAGGGAGTAAAATTGTTATTGATGCAATGGAAACTAACTAAACAAAAAAGGGGGACAATGTGA 3465 0.3913 MAHCSNKDNDPSASQLSWWYVDISYQELKKGSYKVMRSDETFICPYCPERKQDYKYRELLNHASGVGRSSSEKRSAKEKANHLALVKYLEKDLAYMDGPSKPVDKGAKLLSPGETVMPHCSNKDTDISASQISWWYVDTSYEELKKGSHSVKTSDVTFICPYCPRRKQDYLYRELLEHAYMVGRSSSEKRSARERANHLALVKYLENDLIIIMDGPSEPVDKGTKLSLGQTVVAQCSNKETGMSASPINWWYVEKFYKELKKGNHMVQTSDLTLCCPYCPKKRKQDYVYRELLEHASGVGQSSSEKRHVREKATHLALMKYLKNDLKYLNDPSKSVNEGNPPVNRVHQISSQERSVREDATHLPSAKYFKKDLTNVSDPSSKPVNEGTITGSPGETVIGCCSNKDSNISSSQIGRYAEKFYEELKRGIHNVKTSDETFRCPYCSNKKINRDYVYREILEHASGVGQSKSQKRSFIEKANHLALVKYLKKDLMNVGAPCPSKPMDQGTKTISPGETVMGHYSHNDNNIRASQISGWYVHKSYEALKKGSHNVKTSEMTFSCPYCPNKKRKRDYVYREILEHASGVGQSSSEKRSAIEKANHLALMKYLEKDLMIVDGPPKTADEGSPPFNFEKQFVWPWTGIVVNIPTRLTEEGCCVGESGSKLRDEYRSRGFNPQRVRILSNFCGHSGTAVVEFNKNWTGLDNALAFERAYELDHHGKKDWFANTEHKSGIYAWIARADDYKVNNIIGEQLQKMGDIKTISELMEEEARMQDKLLSSLNNTLQVKKKRLKEMEVKYYETSHRMDIVMGEIDKLTQGHNQEMKKIQSSATQHFQNIFNGHERLKLQLESQKRELELRRIELEKREARNESERKKLEEEIMENALKNSSLDMAVLEQQKAGENVLKLAADQKRQKEQFHAKIILLERQLEVKQKLELEIQQLKGKLNVMAYIEDDGDTEVLNKVDALHKDLREKEQSLRDLDSLNQTLIIKERQSNDELQEARKELINGIKEISCRANVGVKRMGELDIRPFLEAMKKKYNDEDAEDRASELCSLWEEYIKDPDWHPFKITMIEGKHQEIIDDDDEKLKGLKNEMGEGVYKAVVTALTEINTYNPSGRYITSELWNYEEGKRATLQEGVKLLLMQWKLTKQKRGTM* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0584 1154 Gene3D XS domain 628 796 IPR038588 -
Gso14g0584 1154 Coils Coil 962 1014 - -
Gso14g0584 1154 Coils Coil 775 795 - -
Gso14g0584 1154 Coils Coil 836 882 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 51 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 282 348 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 401 446 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 449 508 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 166 224 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 117 167 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 567 1154 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 234 282 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 50 108 - -
Gso14g0584 1154 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 517 566 - -
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 567 1154 IPR045177 GO:0080188
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 517 566 IPR045177 GO:0080188
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 1 51 IPR045177 GO:0080188
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 50 108 IPR045177 GO:0080188
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 449 508 IPR045177 GO:0080188
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 117 167 IPR045177 GO:0080188
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 282 348 IPR045177 GO:0080188
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 401 446 IPR045177 GO:0080188
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 166 224 IPR045177 GO:0080188
Gso14g0584 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 234 282 IPR045177 GO:0080188
Gso14g0584 1154 Pfam XS zinc finger domain 276 318 IPR005381 GO:0031047
Gso14g0584 1154 Pfam XS zinc finger domain 160 202 IPR005381 GO:0031047
Gso14g0584 1154 Pfam XS zinc finger domain 44 86 IPR005381 GO:0031047
Gso14g0584 1154 Pfam XS zinc finger domain 560 603 IPR005381 GO:0031047
Gso14g0584 1154 Pfam XS zinc finger domain 440 484 IPR005381 GO:0031047
Gso14g0584 1154 Pfam XS domain 631 742 IPR005380 GO:0031047
Gso14g0584 1154 Pfam XH domain 1020 1150 IPR005379 -
Gso14g0584 1154 Coils Coil 923 943 - -
Gso14g0584 1154 CDD RRM_like_XS 634 741 IPR005380 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0584 Gso-Chr14 5695174 5704479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0584 - - gmx:100790814 2327.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0584 14 5695174 5704479 Gso2g2116 2 45744363 45752419 GST
Gso18g0334 18 3156854 3171831 Gso14g0584 14 5695174 5704479 PCT
Gso13g1283 13 28142442 28149984 Gso14g0584 14 5695174 5704479 PCT
Gso14g0584 14 5695174 5704479 Gso18g0334 18 3156854 3171831 PCT
Gso14g0584 14 5695174 5704479 Gso13g1283 13 28142442 28149984 PCT