Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1422 ATGGTGAATGAATTGACAACAGGTGTTGATTTTGAGAAATTCTCATGGAAAATTGAGGATTTCTCAAAAAAAAATCTCATGAAATTGCGCTCCAAGCCTTTCAAAATCCGGGGTTGTACATGGAGGCTCCTTGTGTATCCACTGAGGAGGGATGTGAATCACTTTTCAGTGTATTTGATGGTTGCTGATTCTTTACCGCCGTACGGATGGAGCAGAAACACTTTTTTCAAGTTAGCTCTAATAAATCAGGTGGATAGGAATAAGTCTATAGCTAAAGAGACACAACAAAAGTTCAATGGAGGATATCGTTGCTGGGGTTCATTTTTCTTGAATCTTACTGATTTCAATAACCCAAAACAAGGGTATCTTGTGAGGAACACATGCATAATCGAAGCACACATATGTGTCTCCGATTTAGCACCTAAGATTCAAGTCCACCCAAATAGTTCTCCCATCCATGACTCTTGTGATCAAGCAACAGAAGAATCATCCTCAGATGATAGGGACACCATTAGTCCAAGAACCTCAGGATCTAGTACTGCAGCAGAAGGTGAAATTCAAGGCTCAAACAATTTGACACTAAGAGAACTCATAGATTTTGAGAGTTTAGGAGCAGAAGAACAAGCATTCATTCCACTCTTGGAAGAGGTTTGCATATGGCACCCTAATCTGATAAAGTGCCAAAGGGAAAGGACTAGAAGGTTTAGACAATGGGCCTTTACTTCTTTGGGCCATGTTTTGCATTTTCTCAAGACCAAAAGGGTTAAAGACATCAATGAAGAGGACATAAAGTACCTTCATGGCTTGTGGAAGGAACTTGTGAAGTCCTCAGGGTTTGACCTGGCTTGGCTGGAGCCATATGTTCAATTAGCATTGGGTTCGAGGGCATATATGGAAAGAGCAAACCAATTGAAGAAGCTGAAGGACAAGGTGGTTGCTTTGGAGATTAAGATGAAGCGGCTCAGGGGGGAACTTGCTGCTGCTGAAGGAGAGTTTGAAGTGGCAAGGAGAGGCTTGTCTGAAGTAAGAAGAGGCTTCAATGAGATGGATTTAAATGCTGCAATTGGTTATGCTATGTTTTGA 1083 0.4146 MVNELTTGVDFEKFSWKIEDFSKKNLMKLRSKPFKIRGCTWRLLVYPLRRDVNHFSVYLMVADSLPPYGWSRNTFFKLALINQVDRNKSIAKETQQKFNGGYRCWGSFFLNLTDFNNPKQGYLVRNTCIIEAHICVSDLAPKIQVHPNSSPIHDSCDQATEESSSDDRDTISPRTSGSSTAAEGEIQGSNNLTLRELIDFESLGAEEQAFIPLLEEVCIWHPNLIKCQRERTRRFRQWAFTSLGHVLHFLKTKRVKDINEEDIKYLHGLWKELVKSSGFDLAWLEPYVQLALGSRAYMERANQLKKLKDKVVALEIKMKRLRGELAAAEGEFEVARRGLSEVRRGFNEMDLNAAIGYAMF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1422 360 Coils Coil 297 331 - -
Gso2g1422 360 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 342 - -
Gso2g1422 360 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Gso2g1422 360 Pfam MATH domain 19 134 IPR002083 GO:0005515
Gso2g1422 360 MobiDBLite consensus disorder prediction 170 185 - -
Gso2g1422 360 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 149 IPR008974 GO:0005515
Gso2g1422 360 MobiDBLite consensus disorder prediction 147 185 - -
Gso2g1422 360 CDD MATH 13 134 IPR002083 GO:0005515
Gso2g1422 360 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 342 - -
Gso2g1422 360 SMART math_3 13 115 IPR002083 GO:0005515
Gso2g1422 360 SUPERFAMILY TRAF domain-like 13 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1422 Gso-Chr2 27350923 27353109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1422 - - gmx:100797919 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1422 2 27350923 27353109 Gso10g0806 10 11760028 11762301 GST
Gso2g1422 2 27350923 27353109 Gso19g1710 19 46001265 46003395 PCT
Gso2g1422 2 27350923 27353109 Gso3g1740 3 43234447 43236838 PCT