Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0806 ATGGTGAATGAATTGACGACAAGTGTTGATTTTGAGAAATTCTCATGGAAAATTGAGGATTTCTCAAAACAAAACGTCATGAAATTGCGTTCAAAGCCTTTCAAAATCCGCGGTTGTACATGGAGGATCCTTGTGTATCCACTGAGGAGGGATGTGAACCATTTTTCAGTGTATTTGATGGTTGCTGATTCTTTACCACCGTACGGATGGAGCAGAAACACGTTTTTCAAGTTAGCTCTAATTAATCAGGTGGATAGGAGCAAGTCCATTGCAAAAGAGACACGCCAAAAGTTCAATGGAGGATATCGTTGCTGGGGTTCATTTTTCTTGAATCTTAGTGATTTCAACCACCCAAAACAAGGGTATCTTGTGAGGAACAAGTGCATAATCGAAGCTCACATTTGTGTCTCCGATTTATCACCTAAGATTCAAGTCCACCCAAATAGTTCTCCAATATTTCATGACTCTCTAAGATGTGGTCAGGCAACAGAATCATCCTCAGATGATAGGGATACCATTAGTCCAAGAACCTCAGGATCTAGTACTGGAGCAGAAGGTGAAACTCATCATCAAGGCTTAAATATTAATTTGATACTAAGAGAAGTACTCGTAGATTTTGAGAGTTTAGGAGCAGAAGAAGAAGCTTTCATTCCACTCTTGGAAGAGGTTTGCATTTGGCACCCTAATCTGATACAGTGCCAAAGGGAAAGGACTAGAAGGTTTAGACAATGGGCCTTTACTTCTTTGGGCCATGTTTTGCATTTTCTCAAGACCAAAAGGGTTAAAGATATCAATGAAGAGGACATAAAGTACCTTCATGGTTTGTGGAAGGAACTTGTCAAGTCCTCAGGGTTTGACCTAACTTGGCTGGAGCCATATGTTCAATCAGCATTGGGTTTGAGGGCTTATATGGAAAGAGCAAACCAATTGAAGAAACTTAAGGACAAGGTGGTTGCTTTGGAGATTAACATGAAGAGGCTCAGAGGGGAACTTGCTGCTGCTGAAGGAGAGTTTGAAGTGGCAAGGAGTGGCTTTTCTGAAGTGAGAAGAGGCTTCAATGAGATGGATGTAAATGCTGCAATTGGTTATGCTATGTTTTAA 1101 0.4078 MVNELTTSVDFEKFSWKIEDFSKQNVMKLRSKPFKIRGCTWRILVYPLRRDVNHFSVYLMVADSLPPYGWSRNTFFKLALINQVDRSKSIAKETRQKFNGGYRCWGSFFLNLSDFNHPKQGYLVRNKCIIEAHICVSDLSPKIQVHPNSSPIFHDSLRCGQATESSSDDRDTISPRTSGSSTGAEGETHHQGLNINLILREVLVDFESLGAEEEAFIPLLEEVCIWHPNLIQCQRERTRRFRQWAFTSLGHVLHFLKTKRVKDINEEDIKYLHGLWKELVKSSGFDLTWLEPYVQSALGLRAYMERANQLKKLKDKVVALEINMKRLRGELAAAEGEFEVARSGFSEVRRGFNEMDVNAAIGYAMF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0806 366 Coils Coil 303 337 - -
Gso10g0806 366 SMART math_3 13 115 IPR002083 GO:0005515
Gso10g0806 366 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 347 - -
Gso10g0806 366 SUPERFAMILY TRAF domain-like 13 138 - -
Gso10g0806 366 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Gso10g0806 366 MobiDBLite consensus disorder prediction 161 188 - -
Gso10g0806 366 CDD MATH 13 134 IPR002083 GO:0005515
Gso10g0806 366 Pfam MATH domain 19 134 IPR002083 GO:0005515
Gso10g0806 366 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 147 IPR008974 GO:0005515
Gso10g0806 366 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0806 Gso-Chr10 11760028 11762301 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0806 - - gmx:102664684 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1422 2 27350923 27353109 Gso10g0806 10 11760028 11762301 GST
Gso10g0806 10 11760028 11762301 Gso19g1710 19 46001265 46003395 PCT
Gso10g0806 10 11760028 11762301 Gso3g1740 3 43234447 43236838 PCT