Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1226 ATGGAATCAACTCATGTAATATCCATTACAAATGGAGAAGAGAATGTTGCTCCAACGAAGAATGCTAAAACATTCCAATTTTCACTTTCACTTCCACCCGTTTTTTCCCGTCTTAGAGAAAACAAATTAATCCAGTTCTCTCTTTTCCCCATCACTTCCTATCTGAGGCAAAAGAAAGACACTAAAAAAATTATCCACAGCATCAAAGTTGGAATCTCCCTTGTATTGATTTCACTCCTGTACTTCGTGGATCCTCTCTATGAGCAAGTTGGAGATAATGCTATATGGGCTATCATGACTGTTGTTGTCACTTTTGAATTTTCTGCGGGAGCTACGCTAGGAAAAGGTTTAAATCGCGGAATGGGAACCATATTAGGAGGTGGACTGGGTTGCATAGCCGCAGTTTTGGCTCAAAACGTTGGCGGAGGAATTGGCAACTCGATTATAATTGGTACTTCTGTATTTATCTTTGGAACAATTGCGACATATTGTCGCCTATTCCCTAGTGTGAAGAAGAGATACGATTACGGAGTGATGATCTTTATCCTCACTTTTAATTTGGTTGTGGTGTCTGGTGTGCGCATTCAAGATCAGAAAGTTTGGAAAATAGCAAGTGAACGTCTTTTAACAATTGTCATGGGTTTCGTTGTGTGCATTTGTGTGAGCTTCTTGGTCTTCCCCTTGTGGGCCAGCGATGAACTTCATGATTCCACTGTCTCTAGATTCCAACACCTTGCCAATGCATTACAAGGCTGCTTGGAGGAATATGTCAAATTTGCTACTGAAAAAGAAAATAAGAAGGCTGGTGCTAGCTTCACTGTTTGCAAGTCGCTGTTGGACTCCAAATCAAAGGATGAGATGCTGGCAAATTTCGCAAAATGGGAACCATGGCATGGAAAATTTGGATTTTTCTATCCATGGGAGAAGTACCTAAAGATTGGAGAGGTTCTTCGAGAACTTGCTGCAATTATTCTTGCTCTGGGAGGTTGCCTCCAAGCCTCAACTACGCCCATGGAATTGGCATCGGTTTGTCAAACAGTCCAATTGGAATCATGTGAAGCAATTGGGTCACGGATTGTGTGGACTCTGCAAGAACTTGGAGACAGCATGAATCAAATGAGGAAAGGTGAGGCAGAGCCTCAAATATCAGCAAAGTTGAAGGCAGCGAGAGCAGAGTTAAGCTTGGTGATTGCCACGTCCAAGATAGCAGCAATTGAGAATATTGATGCACTGGCAGTAGCAAGCTTCGTGTTCTTGCTCAAGAAAGTGGTGGATAAAGTAGAAGAACTGGCCAAAGAAGTGGAGCAAGTTGGAGACATTGCCGGTTTTCGTGCTCATTCAAGTACTATTGTCTCTTCTTAG 1362 0.4236 MESTHVISITNGEENVAPTKNAKTFQFSLSLPPVFSRLRENKLIQFSLFPITSYLRQKKDTKKIIHSIKVGISLVLISLLYFVDPLYEQVGDNAIWAIMTVVVTFEFSAGATLGKGLNRGMGTILGGGLGCIAAVLAQNVGGGIGNSIIIGTSVFIFGTIATYCRLFPSVKKRYDYGVMIFILTFNLVVVSGVRIQDQKVWKIASERLLTIVMGFVVCICVSFLVFPLWASDELHDSTVSRFQHLANALQGCLEEYVKFATEKENKKAGASFTVCKSLLDSKSKDEMLANFAKWEPWHGKFGFFYPWEKYLKIGEVLRELAAIILALGGCLQASTTPMELASVCQTVQLESCEAIGSRIVWTLQELGDSMNQMRKGEAEPQISAKLKAARAELSLVIATSKIAAIENIDALAVASFVFLLKKVVDKVEELAKEVEQVGDIAGFRAHSSTIVSS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1226 453 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 444 - -
Gso2g1226 453 Pfam Aluminium activated malate transporter 58 401 IPR020966 GO:0015743
Gso2g1226 453 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1226 Gso-Chr2 15279945 15285131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1226 58 399 Miscellaneous Gene Families AT5G46600 41.667 3.74e-89 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1226 - - gmx:100527892 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1226 2 15279945 15285131 Gso2g1226 2 15279945 15285131 ECH
Gso2g1226 2 15279945 15285131 Gso10g0224 10 2313515 2315903 GST
Gso19g1290 19 41464097 41466826 Gso2g1226 2 15279945 15285131 PCT
Gso3g1289 3 38621144 38624118 Gso2g1226 2 15279945 15285131 PCT
Gso19g1675 19 45675400 45678060 Gso2g1226 2 15279945 15285131 PCT
Gso3g1703 3 42873122 42875688 Gso2g1226 2 15279945 15285131 PCT
Gso2g1226 2 15279945 15285131 Gso19g1675 19 45675400 45678060 PCT
Gso2g1226 2 15279945 15285131 Gso3g1703 3 42873122 42875688 PCT