Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1675 ATGGATATTGAGTCAACAACGCAAGTAAACAAGGGTGGATTTTTTTCTCGTTTGGGGAACTGCCTCGTGGCTATGCCTAGGAACTTCAAGACCAAGGTTATCAACTTCGCAAGAAGCATAACAAAGATTGGAAAAGATGACCCCAGACGAGTAATTCACTCATTAAAAGTGGCAATTGCTCTCACATTTGTGTCCTTGGTTTACTACTCAAGGCCTCTTTATGATGGCTTCGGAGTTGCGGGAATGTGGGCTGTTCTGACAGTGGTGGTAGTGTTTGAATTCAGCGTAGGTGCAACCCTTAGCAAAGGTTTAAATAGAGGATTTGCTACATTATTAGCTGGTGCTTTAGGGGTTGGAGGGCAACACTTGGCCACTGCTTTTGGAGAAAGAGCAGAACCTATTGTCCTTGGAATCCTGGTCTTCAGTTTAGCCGCAGGGGCTACTTTTTTCAGATTTTTTCCAAAAATCAAGCAAAGATATGACTATGGGATTGTGGTATTTATATTGACATTTTGTTTGGTCGCTGTCTCGGGTTATAGAGTGGAAGAACTCTTCGAGCTTGCTCATCAGAGACTTTCAACAATTTTAATAGGAGCAGCAGCTTGCATGGTCATCTCCATTTTCATTTGTCCAGTATGGGCAGGTGAAGACCTTCACATGTTGGTGGCTTCCAATATTGAAAAGTTGGCAAATTATCTAGAAGTATTCGAAACCGAATATTTTCATTGCTCGGAGGATACAAAAAAGTGTGAGAAGTCAGTTCTTGAAGGATATAAAAGTGTTCTTAATTCTAAAGCAAGTGAAGAATCCTTGGCAAATTTGGCAAGGTGGGAACCAGGACATGGCCGTTTTCCTCTTCGTCATCCTTGGAAGCAGTACTTGAAGATTGGAGCACTTACTCGTGAATGTGCTTACAAGATTGAAACCCTTAACAACTACCTCAACCCGGAAATCCAAGTATCTTTGGAATTCAAGTGTAAAGTTCAGGCACCATGCACAAAGATGACTTCAGAGTCCAACAAGGCATTAAAGGCAATATCTTCATCAATCAAAAAAATGACACACCCATCAGCTGCCAAAGTTCACATAGAAAATTCAAAAACTGCAATTGAAAACCTCAAAGTTGCCCTTGAAATCGTTTCGTTGAAAAATACTGATCTCCTCACCATAATCCCAGTTGCCACAGTTGCATCAATACTCGAAGAAATCACCAAGTCAGTGGAGAAAATATATGAGTCTGTTTCTGAGTTTTCTCACTTAGCCCACTTCAAGAGTGTTGTAGAACCCAATGTCTCACCAGAGAAGCCTCCCCTTCTTCATCGAGGTATCATAAAACCTGTTGTGGATATTGATAACACCGTCGACCATGTTGAAATTACGATCCCAGATATAACTACAGACTCTCTAGAGAAAGAAAAAGCACCAATAACAAAACCCTCCGAACATTTGTAA 1452 0.4105 MDIESTTQVNKGGFFSRLGNCLVAMPRNFKTKVINFARSITKIGKDDPRRVIHSLKVAIALTFVSLVYYSRPLYDGFGVAGMWAVLTVVVVFEFSVGATLSKGLNRGFATLLAGALGVGGQHLATAFGERAEPIVLGILVFSLAAGATFFRFFPKIKQRYDYGIVVFILTFCLVAVSGYRVEELFELAHQRLSTILIGAAACMVISIFICPVWAGEDLHMLVASNIEKLANYLEVFETEYFHCSEDTKKCEKSVLEGYKSVLNSKASEESLANLARWEPGHGRFPLRHPWKQYLKIGALTRECAYKIETLNNYLNPEIQVSLEFKCKVQAPCTKMTSESNKALKAISSSIKKMTHPSAAKVHIENSKTAIENLKVALEIVSLKNTDLLTIIPVATVASILEEITKSVEKIYESVSEFSHLAHFKSVVEPNVSPEKPPLLHRGIIKPVVDIDNTVDHVEITIPDITTDSLEKEKAPITKPSEHL* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1675 483 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 8 1 436 - -
Gso19g1675 483 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
Gso19g1675 483 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1675 Gso-Chr19 45675400 45678060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1675 1 463 Miscellaneous Gene Families AT3G11680 58.774 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1675 - - gmx:100789680 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1675 19 45675400 45678060 Gso3g1703 3 42873122 42875688 GST
Gso19g1675 19 45675400 45678060 Gso2g1226 2 15279945 15285131 PCT
Gso19g1675 19 45675400 45678060 Gso10g0224 10 2313515 2315903 PCT
Gso2g1226 2 15279945 15285131 Gso19g1675 19 45675400 45678060 PCT
Gso10g0224 10 2313515 2315903 Gso19g1675 19 45675400 45678060 PCT