Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1289 ATGGAATCCACACACGTAATAGCCATTACAAATGGAGAAGAGAATATGATTCGTTCATCAAAAGAGAATAAAACATTCCAATTTCAACTTCCACCCATTATTTCCCATCTTGGGAAAAATGAAGTCCACTGTGTCTCCATTACTTCTTCCAATCCCAGACACAAGCAGGTGCAAAGTGGTGGCCATGACACGAGGAAGATAATCCACTGCATCAAAGTGGGAATCTCCTTGGTTTTGGTTTCACTCCTATACCTCTTGAACCCTCTCTTTAAGCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACAGTTGTAGTCATGTTTGAATTCTCTGCAGGAGCCACACTAGGAAAGGGCTTCAATCGTGGACTAGGAACTATTATAGGAGGAGGACTAGGTTGCTTGGCAGCAGTTTTTGCCCAAAGCATTGGAATTGGCAGGGTTGGCAACTCAATTATAATCGGTGCTTCAGTATTTATATTTGGATCAGTAGCTACATATCTTCGACTGGTTCCAAGCATAAAGAAAAGATACGATTATGGGGTAATGATATTCATGCTGACTTTCAATCTAGTTGTGGTTTCTGGCGTACGTGGGGATGTGAAAGTGTGGGAATTAGCCAGGGAGCGTCTCTTGAATATACTAATGGGCTTCATTGTGTGCGTTTGTGTGACTTTGTTCGTCTTCCCTTTGTGGGCCAGCGATGAACTTCACGATTCCACAGTCTCAACATTCCTGGACCTTGCCAATACAATTCAAGGTTGTTTTGGGGAATGTACCAAAATCGTTAGTGGAAAGGAAAACCAACCCCGTGCTAGCTTCAACGTTTGCAAGTCAGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAATTTCGCAAAATGGGAACCCTGGCATGGAAAATTCGGATTTTCCTACCCTTGGGGAAGGTACTTAAAGATTGGTGAAGTTCTTCGAGAACTGGCTGCATTTATTCTTGCAGCAGGACACTGCCTTGAAGCATCAAAAGAGCCCATGGCATCTTTGAGGCAGTCACAATGGGTCCATTTAGAAACATGCGAAGCAGTTGAGACGAAGGTTGTGTATATTCTACGAGAACTTGGTGAAAGCATGAAGCAAATGAGGAAATGTGATGCAAAGGACAACATTTGGGACCAGTTGAAAAATGCCAGAGAAGATTTAAGCTTGATAATTTCCACATCCAAAATGGTGGAGCTTGAGGATTGCCAAGTGCTAGCAATTGCTAGCTTCGTGTTCTTGCTCATGGAAGTGGTAGGGAAGGTTGAGGAATTGGTCAAAGAGGTGGAGGAGCTAGGAGACATTGCTGGTTTTCGCACCACCACAACTTCATTGTCTTCGTAG 1365 0.433 MESTHVIAITNGEENMIRSSKENKTFQFQLPPIISHLGKNEVHCVSITSSNPRHKQVQSGGHDTRKIIHCIKVGISLVLVSLLYLLNPLFKQVGENAMWAIMTVVVMFEFSAGATLGKGFNRGLGTIIGGGLGCLAAVFAQSIGIGRVGNSIIIGASVFIFGSVATYLRLVPSIKKRYDYGVMIFMLTFNLVVVSGVRGDVKVWELARERLLNILMGFIVCVCVTLFVFPLWASDELHDSTVSTFLDLANTIQGCFGECTKIVSGKENQPRASFNVCKSVLNSKSKDESLANFAKWEPWHGKFGFSYPWGRYLKIGEVLRELAAFILAAGHCLEASKEPMASLRQSQWVHLETCEAVETKVVYILRELGESMKQMRKCDAKDNIWDQLKNAREDLSLIISTSKMVELEDCQVLAIASFVFLLMEVVGKVEELVKEVEELGDIAGFRTTTTSLSS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1289 454 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 447 - -
Gso3g1289 454 Pfam Aluminium activated malate transporter 60 440 IPR020966 GO:0015743
Gso3g1289 454 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1289 Gso-Chr3 38621144 38624118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1289 60 401 Miscellaneous Gene Families AT5G46600 42.045 4.61e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1289 - - gmx:100802201 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1290 19 41464097 41466826 Gso3g1289 3 38621144 38624118 GST
Gso3g1289 3 38621144 38624118 Gso2g1226 2 15279945 15285131 PCT
Gso3g1289 3 38621144 38624118 Gso10g0224 10 2313515 2315903 PCT