Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1198 ATGGAACACAACCTCACAATGAAGTGTCGTAGAAATGAAAACCTTCTAACCAGTGGCACTCATTTGCCAGAAAGCCCTCGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTTCTCTTGAGGTCTCTAAAGCCCTTACACTTCCACCACCTCCACCTCTTTCTTCTTACATACCTTCCAAGCCTCCTAATGCACCCTCTTCTGTGACTAACTCCATTTCCGAAGAAACTTCAGAGGAATTCTCAACCATGTGTGGCAACCAGTTCTCTTTTGCTTCCTCTGCCACCTCACAACTTGTCCTTGACCGCATAATGTCACAGTCCGCAAGAGAGGAAGTGTCTCCATTAACGTCAGGTAGATTGTCTCATAGTAGTGAACCTTTGAACGGTGGTGCTTCTTTAACCGGAACGGATAGTCCACCAATTTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTCGAGCAAACAATTCGATTCACCCCTTGTTCAATGGTGGACGAGCCATGAGTGGTGCTACAGGGAATGCCACTCCTTGCTCCGGACCTAAAACAGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAAAAGAAAGAAGAAAACAGAACCCACAATGCTCAACTGCATGCTTCAATTTCTGTTGCCGCGGTGGCAGCTGCAGTTGCAGCCGTCACCGCGGCAACAGCAGCCTCATCTGCAGCTGACAAGGATGACAAGATGGCCATGGCTGTGGCTTCTGCGGCCACGTTAGTTGCTGCTCAGTGTGTGGAGGCTGCTGAAGCAATGGGAGCTGAGAGAGATCACCTTGCTTCTGTGGTTAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATCACAACACTTACAGCTGCAGCTGCCACAGCTCTACGAGGGGCAGCGACCTTGAAAGCAAGAGCATTGAAAGAGGTGTGGAATATTACTGCAGTGACGCCAATTGAGAGTGGCATAGGGATTGGAATATGTGGTAAAGGCAATAACAGTAATTCTAGTACCAGTGATAGTGGGGAGATTATCAATGGTGAAATTTTTTTGGGTGCCTGCAGCCAAGAGCTCCTTGCTAGGGGCACTGCATTACTCAAACGGACACGTAAAGGCGATCTTCACTGGAAAATAGTTTCAGTTTATCTACATCGAACAGGCCAGGTGATGCTGAAAATGAAGAGCAGACATGTAGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGTTAGATGTGTGCATAAATTTACCAGCGTGGCCAGGAAGACATCTGTTTGATGACAGTGAAGAAAGAAGGTATTTTGGATTGAAGACAGAAGCAAGGGGGATTGTGGAGTTCGAATGTAGAAATCAAAGAGAATATGATACCTGGACTCAAGGGGTTTCTAGACTTCTTTCCATGGTTGCAAGCAGACAAAACATAAATGGGGTTTGA 1446 0.4606 MEHNLTMKCRRNENLLTSGTHLPESPRVPMEFLSRSWSASSLEVSKALTLPPPPPLSSYIPSKPPNAPSSVTNSISEETSEEFSTMCGNQFSFASSATSQLVLDRIMSQSAREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRAMSGATGNATPCSGPKTVGRWLKDRREKKKEENRTHNAQLHASISVAAVAAAVAAVTAATAASSAADKDDKMAMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNITAVTPIESGIGIGICGKGNNSNSSTSDSGEIINGEIFLGACSQELLARGTALLKRTRKGDLHWKIVSVYLHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCINLPAWPGRHLFDDSEERRYFGLKTEARGIVEFECRNQREYDTWTQGVSRLLSMVASRQNINGV* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1198 481 MobiDBLite consensus disorder prediction 113 147 - -
Gso2g1198 481 MobiDBLite consensus disorder prediction 55 75 - -
Gso2g1198 481 Pfam Auxin canalisation 23 324 IPR008546 -
Gso2g1198 481 PANTHER AUXIN CANALIZATION PROTEIN 1 479 - -
Gso2g1198 481 PANTHER EXPRESSED PROTEIN 1 479 IPR040269 -
Gso2g1198 481 MobiDBLite consensus disorder prediction 113 144 - -
Gso2g1198 481 Pfam Plant pleckstrin homology-like region 368 472 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1198 Gso-Chr2 14945962 14949994 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1198 - - gmx:100782024 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1198 2 14945962 14949994 Gso2g1198 2 14945962 14949994 ECH
Gso2g1198 2 14945962 14949994 Gso10g0254 10 2632626 2637086 GST
Gso19g1321 19 41920350 41924236 Gso2g1198 2 14945962 14949994 PCT
Gso3g1322 3 39093738 39098191 Gso2g1198 2 14945962 14949994 PCT
Gso2g1198 2 14945962 14949994 Gso19g1321 19 41920350 41924236 PCT
Gso2g1198 2 14945962 14949994 Gso3g1322 3 39093738 39098191 PCT