Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0254 ATGGAACCCAACCTCACAATGAAGTTTCGCAGAAATGAAAACCTTCCAACCAATGGCAAACATTTGCCAGAGAGCCCTCGAGTACCAATGGAGTTTCTGTCTAGATCATGGAGTGCTTCTTCTCTTGAGGTCTCTAAAGCCCTTACACCTCCTTCTTCAATTTCAGACATACCTTCCAAGCCTCCTAATGCACCCTCTTCTGTCAGTGTCACTAACTCCATTTCCGAACAAGCTTCAGAGGAATTCTCAACCATGTGTGGCAACCAGTTCTCTTTTGCTTCCTCTGCCACCTCACAGCTTGTCCTTGACCGCATTATGTCACAGTCCGCTAGAGAGGAAGTGTCTCCATTAACGTCAGGTAGACTGTCTCATAGCAGTGAACCTTTGAACGGTGGTGCTTCTTTAACCGGAACGGATAGTCCACCAATCTCTCCTTCTGCCGAGTTTGACGATGTTGTCAAGTTTTTTCGGGCAAACAATTCCATTCACCCCTTATTCAATGTTGGACGAGCCATGAGTGGTGCTACTACAGGCAATGCCACTCCTTCCTCCGGACCTAAAACAGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAGAAGAAAGAAGAACACAGAGCCCACAATGCTCAACTGCATGCTGCAATTTCTGTTGCTGCGGTGGCAGCTGCAGTTGCAGCCGTCACCGCGGCAACAGCAGCCTCATCTGCAGCTAACAAGGATGAGAAGATGGCCATGGCTGTGGCTTCTGCGGCCACGTTAGTTGCTGCTCAGTGTGTTGAGGCTGCTGAAGCAATGGGAGCTGAGAGAGATCACCTTGCTTCTGTGGTTAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATCACAACACTTACAGCTGCAGCTGCCACAGCTTTACGAGGGGCTGCAACCTTGAAAGCAAGAGCATTGAAGGAGGTGTGGAATATTACTGCAGTGACCCCAATTGAGAGAGGCATAGGGATTGGAATATGTGGTAAAGGCAATAACAGTAATTCTAGCACCAGTGATAGTGGAGAGATTATCAATGGTGAAAATTTTTTGGGTGCCTGCAGCCAAGAGTTCCTAGCTAGGGGCACTGCATTACTCAAACGGACACGTAAAGGTGATCTTCACTGGAAAATAGTTTCAGTCTATATACATCGAACAGGCCAGGTGATGCTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGTTAGATGTGTGCACAAATTTACCAGCGTGGCCAGGAAGGCATCTGTTTGATGACAGTGAAGAAAGAAGGTATTTTGGATTGAAGACAGAAGCAAGGGGGATTGTGGAGTTCGAATGTAGAAATCAAAGAGAATATGATACTTGGACTCACGGGGTTTCTAGACTTCTTTCCATTGTTGCACGCAGACAAAACATAAATGGGGTTTGA 1446 0.4627 MEPNLTMKFRRNENLPTNGKHLPESPRVPMEFLSRSWSASSLEVSKALTPPSSISDIPSKPPNAPSSVSVTNSISEQASEEFSTMCGNQFSFASSATSQLVLDRIMSQSAREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPISPSAEFDDVVKFFRANNSIHPLFNVGRAMSGATTGNATPSSGPKTVGRWLKDRREKKKEEHRAHNAQLHAAISVAAVAAAVAAVTAATAASSAANKDEKMAMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNITAVTPIERGIGIGICGKGNNSNSSTSDSGEIINGENFLGACSQEFLARGTALLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCTNLPAWPGRHLFDDSEERRYFGLKTEARGIVEFECRNQREYDTWTHGVSRLLSIVARRQNINGV* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0254 481 Pfam Plant pleckstrin homology-like region 368 472 IPR013666 -
Gso10g0254 481 MobiDBLite consensus disorder prediction 44 70 - -
Gso10g0254 481 MobiDBLite consensus disorder prediction 112 143 - -
Gso10g0254 481 MobiDBLite consensus disorder prediction 112 144 - -
Gso10g0254 481 MobiDBLite consensus disorder prediction 1 27 - -
Gso10g0254 481 PANTHER AUXIN CANALIZATION PROTEIN 1 479 - -
Gso10g0254 481 PANTHER EXPRESSED PROTEIN 1 479 IPR040269 -
Gso10g0254 481 Pfam Auxin canalisation 23 324 IPR008546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0254 Gso-Chr10 2632626 2637086 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0254 - - gmx:100811415 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1198 2 14945962 14949994 Gso10g0254 10 2632626 2637086 GST
Gso19g1321 19 41920350 41924236 Gso10g0254 10 2632626 2637086 PCT
Gso3g1322 3 39093738 39098191 Gso10g0254 10 2632626 2637086 PCT
Gso10g0254 10 2632626 2637086 Gso19g1321 19 41920350 41924236 PCT
Gso10g0254 10 2632626 2637086 Gso3g1322 3 39093738 39098191 PCT