Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0657 ATGGCACCGAAGCGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTAGGGGAAGGTTGATATTTGGACCGGATGCTAGGTCTCTGCTTGTCACCTTGTTGCTGATCATTGTTCCAGTTATTGTCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCATATAATGCAGGATATGCTATTTTTGTGGTGGCAGTTCTCTTTAATATTTATGTGTTGATTCTTCTCTTTCTTACTTCCTCACGTGATCCGGGCATTATCCCACGGAATTTACATCCACCAGAGGAAGAGTTCCGTTATGACTCTTCAGTTTCTGTTGATATTGGAGGACGCCAAACTCCAAGCCTTCAGTTCCCACGAACAAAAGAAGTAATGGTAAATGGCCATTCTGTGAGGGTGAAATATTGTGACACTTGTATGCTGTATCGTCCTCCTCGTTGTTCGCATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCACCATTGCCCTTGGGTGGGCCAATGTATTGGGCTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCGGCAACTATTCTATGTATCTATGTGTTTTCCATCTCAGCTTTTTACATCAAGGTTCTGATGGATCGTTATCACGGGACAGTTTGGGAGGCAATGAAAGAATCCCCTGCATCTGTTATATTAATGGCATATTGTTTCATCTCTTTGTGGTTTGTCGGTGGATTAACTGGCTTTCATTTGTACCTTATTGGCACAAATCAGACTACCTATGAGAACTTCCGCTACAGAGCCGATAACAGGATCAATGTTTACAACCGGGGTTGTTTAAACAATTTCCTAGAAGTATTTTGTACAAAAGTGAAACCCTCAAGGAACAATTTCCGAGCTTTTGTTCAAGAGGAGGTACCGAGGCCACCTCCTCCGGTCATTTCCCGGGAACCTGAACCAGATCTGGGTGGTGGAGATCCTCGTTCTAAAGTTGAAGATGATCTAGATATTGGTGAAGACCTGTTAAAGATATCACAGCGTCGGAATATTGAAGAAATTGACGAGGACATCCGGAGCAGAGGGAGCATTGGACCTCCCCATAATACATCTGAAGTTGATTCAGTTTTGGGTTCAGATCGCCGGGCCCCAACAATTCGATCCGAAGCAAGGCACTCGAGTGAGGGACGAAGTGAAAGCTGGGAAATTGCGTCCGAGGTCCTTTCCAATTCAAATGTAACTGAAAGCAGAAGCTATGCTGCATCAAAGGAGGTGCGCCAAAAACTTGGGGGTTCTTTTTGA 1293 0.4331 MAPKRVYEAWKGSNKFLFRGRLIFGPDARSLLVTLLLIIVPVIVFCVFVARHLRHEFSSYNAGYAIFVVAVLFNIYVLILLFLTSSRDPGIIPRNLHPPEEEFRYDSSVSVDIGGRQTPSLQFPRTKEVMVNGHSVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSISAFYIKVLMDRYHGTVWEAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRINVYNRGCLNNFLEVFCTKVKPSRNNFRAFVQEEVPRPPPPVISREPEPDLGGGDPRSKVEDDLDIGEDLLKISQRRNIEEIDEDIRSRGSIGPPHNTSEVDSVLGSDRRAPTIRSEARHSSEGRSESWEIASEVLSNSNVTESRSYAASKEVRQKLGGSF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0657 430 ProSiteProfiles DHHC domain profile. 139 189 - -
Gso2g0657 430 Pfam DHHC palmitoyltransferase 138 263 IPR001594 GO:0016409
Gso2g0657 430 MobiDBLite consensus disorder prediction 400 417 - -
Gso2g0657 430 MobiDBLite consensus disorder prediction 351 430 - -
Gso2g0657 430 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 425 - -
Gso2g0657 430 MobiDBLite consensus disorder prediction 381 396 - -
Gso2g0657 430 MobiDBLite consensus disorder prediction 300 333 - -
Gso2g0657 430 MobiDBLite consensus disorder prediction 319 333 - -
Gso2g0657 430 PANTHER S-ACYLTRANSFERASE 6 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0657 Gso-Chr2 6788876 6795341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0657 103 334 Lipid Metabolism Gene Families AT4G22750 27.888 2.78e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0657 K16675 - gmx:100818705 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1317 16 32560643 32571275 Gso2g0657 2 6788876 6795341 GST
Gso2g0657 2 6788876 6795341 Gso20g1358 20 43715280 43720633 PCT
Gso2g0657 2 6788876 6795341 Gso10g1995 10 46938463 46943480 PCT
Gso20g1358 20 43715280 43720633 Gso2g0657 2 6788876 6795341 PCT
Gso10g1995 10 46938463 46943480 Gso2g0657 2 6788876 6795341 PCT