Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1995 ATGGCTGCAAGGCGCGTGTACCAAGTTTGGAAAGGAAGTAATAAATTCATATGTGGAGGGAGGTTGGTATTCGGGCCCGATGCGAGGTCCCTGTTTGTCACCTTGTTGCTGATTATTGTTCCAGTTATCATCTTTTGTGTATGTGTAGCAAGCCATCTCCGGCATGAATTTTCTTCGTATAATTCTGGATATGCTATTTTAGTGGTGGCTATTCTCTTTACTATTCATGTCCTTGTGGTTCTCTTTCTCACTTCATCAGGTGATCCAGGCATCGTTCCAAGGAATCCATATCCACCAGAAGAAGAGTTTCGTTATGATTCTTCAGTTTCTGTTGATGCTGGGGGAGCTGGACGACAAACGCCAAGTCTTCAGTTCCCTCGAACAAAAGAAGTTGTAGTCAATGGCATTGCTGTAAGGGTGAAATATTGTGAGACTTGTATGTTGTATCGTCCTCCTCGTTGCTCGCATTGCTCCATTTGCAACAACTGTGTTGAGCGTTTTGATCACCATTGCCCTTGGGTGGGCCAATGCATTGGTCTGAGGAACTATCGTTACTTCTTCATGTTTGTTTCTTCAGCAACTATTCTGTGCATCTATGTGTTTTCCCTCTCGGCTTTGTACATCAAGGTTCTGATGGATAATTATGACGGCACAGTTTGGAAAGCAATGAAAGAATCCCCTGCTTCTGTGATACTAATGGCTTATTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTGACTGGTTTTCATTTATACCTTCTAGGCACAAATCAGACTACCTATGAAAATTTCCGGTACAGAGCTGACGGAAGGATCAATGTTTTTAACCGGGGCTGCTTAAATAATTTTCTGGAAATGTTTTGCACAAAAGTAAAGCCCTCAAGGAACAATTTCAGGGCATTTGCTCGAGAGGAGGTACCACCGAGACCGCGGGCTCCGATCATTCCCCGGGATCGTGATGACTTGGGCGGAGATCGCCGCCCTAAGGTTGAAGCCGATCTTGATATTGGTGAAGACCTATTGAAGATATCACAGCGCAGGAACATTGAAGAACTTGACGAGGACATTCAGGGCAGAGGGAGCAATGGACCACCCGGCAATACATCTGAACCTGACTCAATTATGTCCTCAGATCATCGAGCTCCCACAATTCGATCCGATGCTAGGCACTTGAGTTGGGAAAGGAGTGGAAACTGGGAAATTGCACAAGATGTCCTTGCCAATTCAAATGTCACAGAAAGCAGAAACTATGTGACTTCAAAGGAAATGCGCCAATGA 1278 0.4468 MAARRVYQVWKGSNKFICGGRLVFGPDARSLFVTLLLIIVPVIIFCVCVASHLRHEFSSYNSGYAILVVAILFTIHVLVVLFLTSSGDPGIVPRNPYPPEEEFRYDSSVSVDAGGAGRQTPSLQFPRTKEVVVNGIAVRVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSATILCIYVFSLSALYIKVLMDNYDGTVWKAMKESPASVILMAYCFISLWFVGGLTGFHLYLLGTNQTTYENFRYRADGRINVFNRGCLNNFLEMFCTKVKPSRNNFRAFAREEVPPRPRAPIIPRDRDDLGGDRRPKVEADLDIGEDLLKISQRRNIEELDEDIQGRGSNGPPGNTSEPDSIMSSDHRAPTIRSDARHLSWERSGNWEIAQDVLANSNVTESRNYVTSKEMRQ* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1995 425 PANTHER S-ACYLTRANSFERASE 6 424 - -
Gso10g1995 425 ProSiteProfiles DHHC domain profile. 141 191 - -
Gso10g1995 425 MobiDBLite consensus disorder prediction 309 329 - -
Gso10g1995 425 MobiDBLite consensus disorder prediction 361 380 - -
Gso10g1995 425 MobiDBLite consensus disorder prediction 347 392 - -
Gso10g1995 425 Pfam DHHC palmitoyltransferase 141 265 IPR001594 GO:0016409
Gso10g1995 425 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1995 Gso-Chr10 46938463 46943480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1995 65 287 Lipid Metabolism Gene Families AT4G22750 28.205 4.09e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1995 K16675 - gmx:100805189 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1995 10 46938463 46943480 Gso10g1995 10 46938463 46943480 ECH
Gso20g1358 20 43715280 43720633 Gso10g1995 10 46938463 46943480 GST
Gso16g1317 16 32560643 32571275 Gso10g1995 10 46938463 46943480 PCT
Gso2g0657 2 6788876 6795341 Gso10g1995 10 46938463 46943480 PCT
Gso10g1995 10 46938463 46943480 Gso16g1317 16 32560643 32571275 PCT
Gso10g1995 10 46938463 46943480 Gso2g0657 2 6788876 6795341 PCT