Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1317 ATGGCACCGAAGCGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTGGAGGAAGGTTGATATTTGGACCGGATGCTAGGTCACTGCTTGTCACCTTGTTGCTGATCATTGTTCCAGTTATTGTCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCATATAATGCAGGATATGCTATTTTGGTGGTGGCAGTTCTCTTTAATATTTATGTGTTGATTCTTCTCTTTCTTACTTCCTCTCGTGATCCGGGCGTTATCCCAAGGAATTTACATCCACCAGAGGAAGAGTTCCGTTATGACTCTTCAGTTTCTGTTGAAATTGGGGGACGCCAAACTCCGAGCCTTCAGTTCCCTCGAACAAAAGAAGTAATGGTAAATGGCCATTCTGTGAAGGTGAAATATTGTGACACTTGTATGCTCTATCGTCCTCCTCGTTGTTCACATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCACCATTGCCCTTGGGTGGGCCAATGTATTGGGCTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCGGCAACTATTCTATGTATCTATGTGTTTTCCATCTCAGCTTTTTACATCAAGGTTCTGATGGATCATTATAAGGGGACAGTTTGGAAGGCAATGAAAGAATCCCCTGCATCTGTTATATTAATGGCATATTGTTTCATCTCTTTGTGGTTTGTCGGTGGACTAACTGGCTTTCATTTGTACCTTATTGGCACAAATCAGACTACCTATGAGAACTTCCGCTACAGAGCCGATAACAGGATCAATGTTTACAATCTGGGTTGTTTTAACAATTTCCTAGAAGTATTTTGTACAAAAGTGAAGCCCTCAAGGAACAATTTCCGAGCTTTTGTTCAAGAGGAGGTACCGAGGCCACCCCCTCCGGTCATTTCCCGGGAACCCGAACCAGATCTGGGTGGTGGAGATCCACGTTCTAAAGTTGAAGACGATCTAGATATCGGTGAAGACCTGTTAAAGATATCACAGCGTCGGAATATTGATGAAATTGACGAGGACATCCGGAGCAGAGGAAGCAATGGACCTCCCCATAATACTTCTGAAGTAGATTCAGTTTTGGGTTCAGATCGCCGGGCCCCAACAATTCGATCTGAAGCAAGGCACTCAAGTGAGGGAAGAAGTGAAAGCTGGGAAATCGGGTCTGAGGTCCTTGCCAATTCAACTGTAACTGAAAGCAGAAGCTATGTTGTATCAAAGGAGGTGCGCCAAAAACTTGGGGGTTCTTTCTGA 1293 0.4323 MAPKRVYEAWKGSNKFLFGGRLIFGPDARSLLVTLLLIIVPVIVFCVFVARHLRHEFSSYNAGYAILVVAVLFNIYVLILLFLTSSRDPGVIPRNLHPPEEEFRYDSSVSVEIGGRQTPSLQFPRTKEVMVNGHSVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSISAFYIKVLMDHYKGTVWKAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRINVYNLGCFNNFLEVFCTKVKPSRNNFRAFVQEEVPRPPPPVISREPEPDLGGGDPRSKVEDDLDIGEDLLKISQRRNIDEIDEDIRSRGSNGPPHNTSEVDSVLGSDRRAPTIRSEARHSSEGRSESWEIGSEVLANSTVTESRSYVVSKEVRQKLGGSF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1317 430 Pfam DHHC palmitoyltransferase 138 263 IPR001594 GO:0016409
Gso16g1317 430 MobiDBLite consensus disorder prediction 353 402 - -
Gso16g1317 430 ProSiteProfiles DHHC domain profile. 139 189 - -
Gso16g1317 430 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 425 - -
Gso16g1317 430 MobiDBLite consensus disorder prediction 381 396 - -
Gso16g1317 430 PANTHER S-ACYLTRANSFERASE 6 425 - -
Gso16g1317 430 MobiDBLite consensus disorder prediction 300 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1317 Gso-Chr16 32560643 32571275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1317 65 334 Lipid Metabolism Gene Families AT4G22750 26.148 3.50e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1317 K16675 - gmx:100795934 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1317 16 32560643 32571275 Gso2g0657 2 6788876 6795341 GST
Gso16g1317 16 32560643 32571275 Gso20g1358 20 43715280 43720633 PCT
Gso16g1317 16 32560643 32571275 Gso10g1995 10 46938463 46943480 PCT
Gso20g1358 20 43715280 43720633 Gso16g1317 16 32560643 32571275 PCT
Gso10g1995 10 46938463 46943480 Gso16g1317 16 32560643 32571275 PCT