Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0591 ATGGGAGCTAGTCGAAAGCTTCAGGGCGAGATTGATCGTGTTCTCAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGGTTTACGACACCGATAATGCCAACCAGAAGGAGAAGTTCGAGGCTGACCTGAAGAAGGAGATTAAGAAGCTGCAGAGGTACAGGGACCAGATTAAGACATGGATTCAGTCCAGTGAGATCAAAGACAAGAAGGTTAGTGCCTCATATGAGCAGGCTCTGGTGGATGCACGCAAGATTATTGAGCGTGAAATGGAAAGATTCAAGATCTGTGAGAAGGAGACAAAAACAAAAGCATTCTCCAAAGAAGGCTTAGGTCAACAGCCTAAAACTGATCCTAGAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGGGAGTTAGAAAATCAAATCGATAACTTTGAAGCTGAGCTTGAGGGACTTTCTGTCAAGAAAGGAAAGAACAGGCCACCCAGATTGACACATCTAGAAACATCAATTACTCGGCACAAGGCTCATATAAAGAAATGTGAATTTATCTTGAGGCTACTAGATAATGATGAACTAAGTCCAGAGGAGGTTAATGATGTCAAGGATTTCCTGGATGACTATGTAGACCGTAATCAGGAGGACTTTGAAGAATTTAGTGATGTTGATGAGCTATATAGTTCATTACCCTTAGACAAGGTGGAGTCAATTGAAGATATTGTTACAATTCCCCCTGGTCTTGCTAAGGTGGCACCTGTGCTTAGCTTGAAGCCTTCTGTGGTAGCATCAGCTTCAGCATCACAAACATCTGAGCAAGCTGATGATACAGCTTCCCAGGATAGCAATTCTGATATTGTTGCAGGAACTCCACCTCCTAAAAGTAGTATAGTTAGTCCTACTACTACAACACCAGCAGGGAATTTTTCTACTCCTGTTTCTATGAATGTTCCCATGCCTAACTTGTCGAGTCCACCAGCCATTGCGTCAGCCATGCCTGGTTCAAATTCTGTTCGGAGTTCCTTGGAGATTAGTAGTCCTGTCAATGCTTCATCTTTTGTAAATCAGTCTAGCACTATGAAGGAGGAAGAGATTAATAGTTTCCCTGGCCAAAGACCATCTCCATCACTTTCTGATGTTGCACTTGTAAGGAACATCAGCAGAAACAGCTTATCAAATCAAGCAACAAATAACATACCTCTTGTTTCTGGCAATATGGTTTCCAGCAATGGGCCCCTTGGTTCAGTCCCTTCAGCATCTGAAATAACCAAGAGAAACATATTGGTAGTTGATGATAGACTCGGAAGCAATGGGATGGTGCAGCCTCTTGTATCCCCTTTAAGTAATAGAATGATCATGCCTCAGGTTGCAAGGCCTAATGATGGAACTTCCTCAGTTGACTCTAGTAGTGTCAACGAAGCTGCAACTGTATCTGGGAGAGTTTTCTCCCCTTCTGCTGTTCCTGGCATGCAATGGAGACCTGGAAGCCCCTTCCAGAATCAGAATGATGTGGGTCAGATTCGTGGAAGAACTGAAATAGCTCCAGATCAAAGGGAAAGGTATTTGCAGAAGTTGCAGCAAGTGCAGCAACAAGGGCAAAGTGCCCTTCTTAATATGCCATCTTTTGTAGGAGGGAATTCTAAGCAGTTTTCTGCTCAGCAACAAAATCCTCTCTTACAGCAGTTCAATTCTCAAGGCTCATCTGTTGCTTCTCAATCTAGCGTGGGACTTGGAGTCCAGTCACCAGGTCTTAGTGGTATTGCTTCCACCTCATTACCGCAGCCACCCAATTCTGTCCATTCCCCATCTAGCCAACAATCATTGCTATTAGTTGTTTCCAAAGATGCAGATGTTGGAAATTCTAAGGTTGACGAGCCACAACTACATATTTTTCCTGATGATTCGGGGACTGAATCTACTGCTAGTACTGGGATTGGCAAAAATTTCGTGAATGAAGATGAATTGAAATCCACATATGCCGTAGATTCTCCTACAGGAGTACCTGCCTCTCTTCCAGAGCCTGCTCAGACTTCTAGAGATATTGATTTGTTTCCTGGCCAACCTTTACAACCAAATCAGCGTAGTGGTAACCTTGGTGTTATAGGAAGAAGTTTGACTGACCTTGGAGCTGTTGGTGACAACTTCAGTGCATCAACTGCTAATTCTGGCGGAGTTCGTGATCAATTATATAATTTGCAGATGCTTGAGGCAGCTCACCTCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATTGTTAATAATCCTGCTTTTTGGGAGAGAGTAGGTATTGAACAATATGGCACTGATACCCTGTTCTTTGCATTTTACTATCAACAGAACACTTACCAACAGTATATGGCTGCAAAAGAGCTAAAGAAGCAGTCTTGGAGATATCACCGGAAGTATAACACATGGTTTCAACGGCATGAAGAGCCAAAAGTTGCAACAGATGAATATGAGCAAGGAACATATGTGTACTTTGATTTCCATATTGCAAATGATGATCTGCAACATGGGTGGTGTCAAAGAATCAAGACCGACTTCACCTTTGAATATAATTATCTTGAAGATGAGCCTATTGTCTAA 2661 0.4295 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKIIEREMERFKICEKETKTKAFSKEGLGQQPKTDPREKAKSETRDWLNNVVGELENQIDNFEAELEGLSVKKGKNRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEEVNDVKDFLDDYVDRNQEDFEEFSDVDELYSSLPLDKVESIEDIVTIPPGLAKVAPVLSLKPSVVASASASQTSEQADDTASQDSNSDIVAGTPPPKSSIVSPTTTTPAGNFSTPVSMNVPMPNLSSPPAIASAMPGSNSVRSSLEISSPVNASSFVNQSSTMKEEEINSFPGQRPSPSLSDVALVRNISRNSLSNQATNNIPLVSGNMVSSNGPLGSVPSASEITKRNILVVDDRLGSNGMVQPLVSPLSNRMIMPQVARPNDGTSSVDSSSVNEAATVSGRVFSPSAVPGMQWRPGSPFQNQNDVGQIRGRTEIAPDQRERYLQKLQQVQQQGQSALLNMPSFVGGNSKQFSAQQQNPLLQQFNSQGSSVASQSSVGLGVQSPGLSGIASTSLPQPPNSVHSPSSQQSLLLVVSKDADVGNSKVDEPQLHIFPDDSGTESTASTGIGKNFVNEDELKSTYAVDSPTGVPASLPEPAQTSRDIDLFPGQPLQPNQRSGNLGVIGRSLTDLGAVGDNFSASTANSGGVRDQLYNLQMLEAAHLKLPQPKDSERPRTYTPKHPTITPPSFPQVQAPIVNNPAFWERVGIEQYGTDTLFFAFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTDFTFEYNYLEDEPIV* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0591 886 MobiDBLite consensus disorder prediction 744 770 - -
Gso2g0591 886 Coils Coil 41 61 - -
Gso2g0591 886 MobiDBLite consensus disorder prediction 626 649 - -
Gso2g0591 886 PANTHER CCR4 NOT-RELATED 1 884 IPR040168 GO:0030015
Gso2g0591 886 Gene3D - 727 881 IPR038635 -
Gso2g0591 886 PANTHER BNAA10G16600D PROTEIN 1 884 - -
Gso2g0591 886 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Gso2g0591 886 MobiDBLite consensus disorder prediction 110 131 - -
Gso2g0591 886 MobiDBLite consensus disorder prediction 492 511 - -
Gso2g0591 886 Coils Coil 132 159 - -
Gso2g0591 886 PIRSF NOT_su_3_5 1 886 IPR012270 GO:0006355|GO:0030015
Gso2g0591 886 Pfam NOT2 / NOT3 / NOT5 family 743 880 IPR007282 GO:0006355
Gso2g0591 886 MobiDBLite consensus disorder prediction 589 609 - -
Gso2g0591 886 MobiDBLite consensus disorder prediction 269 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0591 Gso-Chr2 6163416 6174614 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0591 K12580 - gmx:100780204 1668.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1222 16 31544257 31558126 Gso2g0591 2 6163416 6174614 GST
Gso19g0936 19 36304297 36323697 Gso2g0591 2 6163416 6174614 PCT
Gso16g0348 16 3914832 3925769 Gso2g0591 2 6163416 6174614 PCT
Gso2g0591 2 6163416 6174614 Gso19g0936 19 36304297 36323697 PCT
Gso2g0591 2 6163416 6174614 Gso16g0348 16 3914832 3925769 PCT