Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0292 ATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGTTGCACGAGCAAGATTGTCTCGAAGGAAGAAATGGCAGGAGAATCATACGAGGAAGCCATCGCGAGTCTGACCAAGCTTCTCAGTGAAAAAGCTGACCTCGGTGGTGTTGCCGCCGCAAAGATCAAGGATCTGACGGCGGAGCTTGATGCCGCCGGTTCGAAGCCGTTTAACCCGGAGGAGAGGATCAGAACCGGCTTCATCCAATTTAAGAATGAGAAATTTGAGAAAAATCCTGATCTATATGGCGAACTTGCCAAAGGCCAGAGCCCAAAGTTTATGGTATTTGCATGCTCAGATTCGAGAGTTTGTCCATCTCATATTCTGGATTTCCAACCGGGTGAGGCCTTTATGGTCCGAAACATTGCCAACATGGTTCCCCCATATGACAAGACGAAGTATTCAGGAGCAGGGGCTGCCATAGAATATGCAGTGTTGCATTTAAAGGTGGAGAATATTGTAGTTATTGGACACAGTTGCTGTGGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGTGAATTCATAGAGCAATGGGTCCAAATTTGTACTCCAGCAAAGTCCAAGGTTAAAGCAGGAAAAAGTGACTTAAGTTTTTCAGAGCAATGTACTAACTGTGAGAAGGAAGCTGTGAATGTATCACTTGGTAACCTATTAACATATCCATTTGTTAGAGATGGTGTTGTTAACAAAACTCTGGCTTTGAAAGGAGCACATTATGATTTCGTTAATGGCAATTTTGAGCTGTGGGATTTGAACTTCAAACTTTTGCCCACTATATCCGTTTAA 837 0.4409 MAGALKKCMMLCCTSKIVSKEEMAGESYEEAIASLTKLLSEKADLGGVAAAKIKDLTAELDAAGSKPFNPEERIRTGFIQFKNEKFEKNPDLYGELAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFMVRNIANMVPPYDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIEQWVQICTPAKSKVKAGKSDLSFSEQCTNCEKEAVNVSLGNLLTYPFVRDGVVNKTLALKGAHYDFVNGNFELWDLNFKLLPTISV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0292 278 CDD beta_CA_cladeB 77 266 IPR045066 GO:0004089|GO:0008270
Gso2g0292 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 153 173 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso2g0292 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso2g0292 278 Pfam Carbonic anhydrase 105 262 IPR001765 GO:0004089|GO:0008270
Gso2g0292 278 Gene3D Carbonic anhydrase 63 278 IPR036874 GO:0004089|GO:0008270
Gso2g0292 278 PANTHER CARBONIC ANHYDRASE 23 278 IPR001765 GO:0004089|GO:0008270
Gso2g0292 278 SUPERFAMILY beta-carbonic anhydrase, cab 72 275 IPR036874 GO:0004089|GO:0008270
Gso2g0292 278 SMART Pro_CA_2 97 267 IPR001765 GO:0004089|GO:0008270
Gso2g0292 278 PANTHER CARBONIC ANHYDRASE 23 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0292 Gso-Chr2 3164845 3174862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0292 K01673 - gmx:100803945 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0292 2 3164845 3174862 Gso2g0292 2 3164845 3174862 ECH
Gso2g0292 2 3164845 3174862 Gso19g0069 19 794778 799522 ECH
Gso1g0272 1 3208106 3219245 Gso2g0292 2 3164845 3174862 GST
Gso2g0292 2 3164845 3174862 Gso18g1120 18 20484546 20491896 PCT
Gso18g1120 18 20484546 20491896 Gso2g0292 2 3164845 3174862 PCT