Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0272 ATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGTTGCACGAGCAAGATTGTCTCGAAGGAAGAGATGGCAGGAGAATCATACGAGGAAGCCATCACGAGTCTGACCAAGCTTCTCAGTGAGAAAGCTGAGCTCGGTGGCGTTGCCGCCGCAAAGATAAAGGAGCTGACGGCGGAGCTTGATGCCGCCGGTTCGAAGCCGTTTAACCCGGAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGAGAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAGTTTATGGTATTTGCATGCTCAGACTCGAGAGTTTGTCCATCTCATATTCTGGATTTCCAACCGGGTGAAGCCTTTATGGTCCGAAACATTGCTAACATGGTTCCACCATATGACAAGACGAAGTATTCAGGAGCTGGGGCTGCCATTGAATATGCAGTATTGCATTTAAAGGTGGAGAATATTGTAGTTATTGGACACAGTTGCTGTGGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGTGAATTCATAGAGCAATGGGTCCAAATTTGTACTCCAGCAAAGTCCAAGGTTAAAGCAGGACCAAGTGACTTAAGTTTCTCAGAGCAATGTACTAACTGTGAGAAGGAAGCTGTGAACGTATCACTTGGTAACCTATTAACATATCCATTTGTTAGAGATGGAGTTGTTAACAAAACTCTGGCTTTGAAAGGAGCACATTATGATTTCGTTAATGGTACTTTTGAGCTATGGGATTTGAACTTCAAACTTTTTCCCACTGTATCCGTTTAA 837 0.4409 MAGALKKCMMLCCTSKIVSKEEMAGESYEEAITSLTKLLSEKAELGGVAAAKIKELTAELDAAGSKPFNPEERIRTGFIHFKNEKFEKNPYLYGELAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFMVRNIANMVPPYDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIEQWVQICTPAKSKVKAGPSDLSFSEQCTNCEKEAVNVSLGNLLTYPFVRDGVVNKTLALKGAHYDFVNGTFELWDLNFKLFPTVSV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0272 278 CDD beta_CA_cladeB 77 266 IPR045066 GO:0004089|GO:0008270
Gso1g0272 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 153 173 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso1g0272 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso1g0272 278 PANTHER CARBONIC ANHYDRASE 23 278 - -
Gso1g0272 278 SUPERFAMILY beta-carbonic anhydrase, cab 72 276 IPR036874 GO:0004089|GO:0008270
Gso1g0272 278 SMART Pro_CA_2 97 267 IPR001765 GO:0004089|GO:0008270
Gso1g0272 278 Pfam Carbonic anhydrase 105 262 IPR001765 GO:0004089|GO:0008270
Gso1g0272 278 Gene3D Carbonic anhydrase 63 278 IPR036874 GO:0004089|GO:0008270
Gso1g0272 278 PANTHER CARBONIC ANHYDRASE 23 278 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0272 Gso-Chr1 3208106 3219245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0272 K01673 - gmx:100810496 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0272 1 3208106 3219245 Gso2g0292 2 3164845 3174862 GST
Gso1g0272 1 3208106 3219245 Gso18g1120 18 20484546 20491896 PCT
Gso18g1120 18 20484546 20491896 Gso1g0272 1 3208106 3219245 PCT