Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1120 ATGGCAGGAGGATCATACGAGGAAGCCATTGCAGCGTTGACCAAGCTTATCAGCGAGAAAGCCGACCTGAGTGGCGTCGCCGCCGCAAAGATCAAGCAGTTGACGGCGGAGCTAGAAACCGCCACCGCAAACGGGTCGACGCCGTTTAACCCAGACGAGAGGATCCGAACCGGGTTCGCCCACTTCAAGAACGAGAAATTTCAGAAGAACCCGGAATTATATGGCGAACTTGCCAAAGGCCAGAGTCCAAAGTTTATGGTGTTTGCTTGCTCAGACTCTCGAGTTTGCCCATCCCACATTCTGGATTTCAATCCGGGTGAAGCCTTTGTGGTCCGAAATATCGCCAACATGGTTCCACCATATGACAAGACCAAGTATTCAGGAACAGGGGCGGCCATTGAATATGCTGTCGTACATTTAAAGGTGGAGAATATTGTGGTCATTGGACACAGCTGCTGTGGAGGTATAAAGGGCCTCATGTCTATCCCAGATGATGGGACCACTGCAAGTGAATTCATAGAGCACTGGGTCCAAATTTGCACTCCAGCAAAGTCTAAGGTTAAAACAGAAGCAAGCACATTAGAATTTTCTGAGCAGTGTACTAACTGCGAAAAGGAAGCTGTGAATGTATCACTTGGGAACCTATTGACTTATCCCTTTGTGAGGGATGCGGTTGTGAAGAAGAAAACACTTGCCTTGAAAGGTGCACATTACAATTTCGTTAAGGGCACATTTGAGCTTTGGGATCTGGACTTCAAAATCTCTAACTCTGTATCCGTTTAA 783 0.4751 MAGGSYEEAIAALTKLISEKADLSGVAAAKIKQLTAELETATANGSTPFNPDERIRTGFAHFKNEKFQKNPELYGELAKGQSPKFMVFACSDSRVCPSHILDFNPGEAFVVRNIANMVPPYDKTKYSGTGAAIEYAVVHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIEHWVQICTPAKSKVKTEASTLEFSEQCTNCEKEAVNVSLGNLLTYPFVRDAVVKKKTLALKGAHYNFVKGTFELWDLDFKISNSVSV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1120 260 Pfam Carbonic anhydrase 86 244 IPR001765 GO:0004089|GO:0008270
Gso18g1120 260 Gene3D Carbonic anhydrase 40 260 IPR036874 GO:0004089|GO:0008270
Gso18g1120 260 CDD beta_CA_cladeB 58 248 IPR045066 GO:0004089|GO:0008270
Gso18g1120 260 PANTHER CARBONIC ANHYDRASE 1 260 IPR001765 GO:0004089|GO:0008270
Gso18g1120 260 SUPERFAMILY beta-carbonic anhydrase, cab 38 254 IPR036874 GO:0004089|GO:0008270
Gso18g1120 260 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 134 154 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso18g1120 260 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 90 97 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso18g1120 260 PANTHER CARBONIC ANHYDRASE 1 260 - -
Gso18g1120 260 SMART Pro_CA_2 78 249 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1120 Gso-Chr18 20484546 20491896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1120 K01673 - gmx:100795969 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0272 1 3208106 3219245 Gso18g1120 18 20484546 20491896 PCT
Gso2g0292 2 3164845 3174862 Gso18g1120 18 20484546 20491896 PCT
Gso18g1120 18 20484546 20491896 Gso1g0272 1 3208106 3219245 PCT
Gso18g1120 18 20484546 20491896 Gso2g0292 2 3164845 3174862 PCT