Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0069 ATGTCGACCTCTTCCATTAACGGGTGGTGCCTCTCTTCCATCTCCCCAGCCAAAACCTCTCTCAAGAAGGCCACATTAGGCCCTTCTGTCTTCGCAACCGTTAGCACTCCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCCTTCCCTTCTCTCATTCAAGACAGGCCTGTCTTTGCTGCCCCTGCCCCCATCATCACCCCAACTGTGAGAGAGGATATGGCAAAGGAATACGAGCAAGCTATTGAAGAACTCCAGAAATTGTTGAGGGAGAAGAGTGAACTCAAAGCCACAGCTGCTGAGAAAGTGGAGCAGATAACAGCTTCTCTGGGAACATCATCATCTGATGGCATCCCATCATCAGAAGCCTCAGACAGGATCAAAGCTGGTTTCATTCACTTCAAGAAGGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAGAGCCCCAAGTTTATGGTGTTTGCTTGCTCAGACTCAAGGGTGTGCCCATCTCATGTGCTAGATTTCCAACCAGGAGAGGCCTTTGTGGTCAGAAATGTTGCTAACATTGTCCCACCATATGACCAGTCAAAATACGCTGGAACTGGGGCAGCAGTTGAGTATGCTGTTTTGCATCTTAAGGTGTCTGAGATTGTGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTCTGTCTTTCCCATATGATGGAACCTACTCTACTGATTTTATTGAGGAGTGGGTCAAAATTGGCTTGCCTGCAAAGGCAAAGGTGAAGACACAGCATGGGGATGCACCTTTTGCTGAGTTGTGCTCACACTGTGAGAAGGAAGCTGTGAATGTTTCCCTTGGAAACCTTCTAACATACCCATTTGTTAGAGATGGCTTGGTGAACAAGACATTGTCACTAAAAGGAGGATACTATGACTTTGTTAAGGGATCTTTTGAGCTCTGGGGCCTTCAGTTTGGCCTTGCATCCTCTTTCTCCGTTAAAGATGTGGCCACCATTCTGCATTGGAAGCTATAG 1029 0.4674 MSTSSINGWCLSSISPAKTSLKKATLGPSVFATVSTPSSPSSSSSSSSFPSLIQDRPVFAAPAPIITPTVREDMAKEYEQAIEELQKLLREKSELKATAAEKVEQITASLGTSSSDGIPSSEASDRIKAGFIHFKKEKYDKNPALYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQSKYAGTGAAVEYAVLHLKVSEIVVIGHSACGGIKGLLSFPYDGTYSTDFIEEWVKIGLPAKAKVKTQHGDAPFAELCSHCEKEAVNVSLGNLLTYPFVRDGLVNKTLSLKGGYYDFVKGSFELWGLQFGLASSFSVKDVATILHWKL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0069 342 Pfam Carbonic anhydrase 158 315 IPR001765 GO:0004089|GO:0008270
Gso19g0069 342 Gene3D Carbonic anhydrase 111 331 IPR036874 GO:0004089|GO:0008270
Gso19g0069 342 PANTHER CARBONIC ANHYDRASE 1 331 IPR001765 GO:0004089|GO:0008270
Gso19g0069 342 Coils Coil 71 105 - -
Gso19g0069 342 CDD beta_CA_cladeB 130 319 IPR045066 GO:0004089|GO:0008270
Gso19g0069 342 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 331 - -
Gso19g0069 342 SMART Pro_CA_2 150 320 IPR001765 GO:0004089|GO:0008270
Gso19g0069 342 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 206 226 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso19g0069 342 SUPERFAMILY beta-carbonic anhydrase, cab 124 325 IPR036874 GO:0004089|GO:0008270
Gso19g0069 342 MobiDBLite consensus disorder prediction 32 51 - -
Gso19g0069 342 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 162 169 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0069 Gso-Chr19 794778 799522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0069 K01673 - gmx:100781868 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0069 19 794778 799522 Gso19g0069 19 794778 799522 ECH
Gso2g0292 2 3164845 3174862 Gso19g0069 19 794778 799522 ECH
Gso5g0063 5 667110 673376 Gso19g0069 19 794778 799522 GST