Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0089 ATGGTTGCCCCTTGTCCAACATCCATGATGGTAAGAACCAAGAAAACAAAGGCCATGGGAGTTCCGACGATAGACCTTTCCCTGGAAAGATCGAAGTTGGCAGAACTAGTGGTGAAAGCATGTGAGGAATACGGTTTCTTCAAGGTGGTGAATCACAGTGTGCCAAAGGAGGTTATTGCAAGATTGGAAGAGGAGGGAAAGGAGTTTTTCTCCAAAACCTCCTCGGAGAAGCGCCAAGCTGGCCCTGCCAATCCTTTTGGCTATGGCTGCAGAAATATTGGCCCCAATGGTGATATGGGTCACCTCGAGTATCTCCTCCTTCATACCAATCCTCTTTCTATATCTGAGAGATCCAAAACCATAGCAAAAGACCCTACTAAGTTCAGTTGTGTCGTGAATGATTACATAGAAGCAGCTAAGGAACTAACATGTGAGCTTCTTGATCTGGTGGCGGAGGGTTTGTGGGTCCAAGACAAATTCTCACTCAGCAAGCTCATCAGAGACGTTCATAGTGACTCACTTCTAAGGATCAATCAATACCCTCCCGTGAGCCTAAAGGGCACCAAGAATTGGGACACGTCCAAAGTTGAGGCACGTCAAATCCAGAGCCAAAATAATAACAACAACAACAACAACAACATTGGCTTTGGAGAGCATTCTGACCCTCAGATCTTGACCATCATGCGGTCCAACAACGTTGATGGCCTTCAGATTTCCACCCACGATGGCTTGTGGATCCCTGTCCCCCCTGACCCCAATGAATTCTTCGTTATGGTTGGCGATGCCTTGCAGGTTTTGACAAATGGAAGGTTTGCAAGCGTGAGACACAGGGTGTTGACGAACACAACAAAGGCCAGAATGTCAATGATGTACTTTGCAGCACCACCGCTGAATAGGTGGATCACTCCACTGCCAATGATGGTGACACCCCACAATCCAAGTCTCTATAAGCCCTTTACGTGGGCCCAATACAAGCAAGCAGCATACTCTCTAAGATTGGGAGACGCTCGCCTTGACCTCTTCAAGATCCAACGACAACAAGATACCCATCTCGCACCTGCTTCTCCCTGA 1071 0.4771 MVAPCPTSMMVRTKKTKAMGVPTIDLSLERSKLAELVVKACEEYGFFKVVNHSVPKEVIARLEEEGKEFFSKTSSEKRQAGPANPFGYGCRNIGPNGDMGHLEYLLLHTNPLSISERSKTIAKDPTKFSCVVNDYIEAAKELTCELLDLVAEGLWVQDKFSLSKLIRDVHSDSLLRINQYPPVSLKGTKNWDTSKVEARQIQSQNNNNNNNNNIGFGEHSDPQILTIMRSNNVDGLQISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFASVRHRVLTNTTKARMSMMYFAAPPLNRWITPLPMMVTPHNPSLYKPFTWAQYKQAAYSLRLGDARLDLFKIQRQQDTHLAPASP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0089 356 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 344 - -
Gso2g0089 356 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 4 344 - -
Gso2g0089 356 Gene3D - 3 332 IPR027443 -
Gso2g0089 356 SUPERFAMILY Clavaminate synthase-like 6 335 - -
Gso2g0089 356 Pfam 2OG-Fe(II) oxygenase superfamily 207 294 IPR044861 -
Gso2g0089 356 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 295 IPR005123 -
Gso2g0089 356 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 85 IPR026992 -
Gso2g0089 356 PRINTS Isopenicillin N synthase signature 37 54 - -
Gso2g0089 356 PRINTS Isopenicillin N synthase signature 219 240 - -
Gso2g0089 356 PRINTS Isopenicillin N synthase signature 255 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0089 Gso-Chr2 958226 962571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0089 12 343 Glycosyltransferase AT5G59530 25.581 2.54e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0089 K04125 - gmx:100809097 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0089 2 958226 962571 Gso2g0089 2 958226 962571 ECH
Gso2g0089 2 958226 962571 Gso10g0095 10 1013683 1017956 GST
Gso19g1841 19 47118212 47124083 Gso2g0089 2 958226 962571 PCT
Gso3g1877 3 44332177 44337014 Gso2g0089 2 958226 962571 PCT
Gso2g0089 2 958226 962571 Gso19g1841 19 47118212 47124083 PCT
Gso2g0089 2 958226 962571 Gso3g1877 3 44332177 44337014 PCT