Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0095 ATGGTTGCGCCTTGTCCAACATCCATGATGGTAAGAACCAAGAAAACAAAGGCCATGGGAGTTCCGACAATAGACCTTTCAATGGAAAGGTCCAAGTTGTCGGAACTGGTGGTGAAAGCATGTGAGGAATATGGTTTCTTCAAGGTGGTGAACCACAGTGTGCAAAAAGAGGTCATTGCAAGATTGGAAGAGGAGGGAAAGGAGTTTTTCTCCAAAACCTCCTCGGAGAAGCGCCAAGCTGGCCCTGCCAATCCTTTTGGCTATGGTTGCAGAAATATTGGCCCCAATGGCGATATGGGTCACCTCGAGTATCTCCTCCTTCATACCAACCCTCTTTCCATATCTGAGAGATCCAAAACCATAGCAAATGACCCTACTAAGTTCAGTTGTGCCGTGAATGATTACATAGAAGCAGTTAAAGAACTAACATGTGAGGTTCTCGATATGGTGGAGGAGGGTTTGTGGGTCCAAGACAAGTTCTCACTCAGCAAGCTCATCAGAGACGTCCATAGTGACTCACTCCTAAGGATCAATCAATACCCTCCCGTGAGCCTAAAGGGCACCAAGAATTGGGACACGTCCAAACTTGAGGCACATCAACTCCAGAGCGAAAATAATAATAACAACAACAACAATATTGGCTTTGGAGAGCATTCTGACCCTCAGATCTTGACCATCATGCGGTCCAACAACGTTGATGGCCTTCAGATTTCCACCCACGATGGCTTGTGGATCCCTGTCCCCCCTGACCCCAATGAATTCTTCGTTATGGTTGGTGATGCCTTGCAGGTTTTGACAAATGGAAGGTTTGTAAGCGTGAGACACAGGGTGTTGACGAACACAACAAAGGCCAGAATGTCAATGATGTACTTTGCAGCACCACCGCTGAATTGGTGGATCACTCCACTGCCGAAGATGGTGACACCCCACAATCCAAGTCTCTATAAGCCCTTCACCTGGGCCCAATACAAGCAGGCAGCATATTCTCTAAGATTGGGAGACGCTCGCCTTGACCTCTTCAAGATCCAACGACAACAAGATACCCATCTCATCGCACCTGCTTCAACCTGA 1071 0.4753 MVAPCPTSMMVRTKKTKAMGVPTIDLSMERSKLSELVVKACEEYGFFKVVNHSVQKEVIARLEEEGKEFFSKTSSEKRQAGPANPFGYGCRNIGPNGDMGHLEYLLLHTNPLSISERSKTIANDPTKFSCAVNDYIEAVKELTCEVLDMVEEGLWVQDKFSLSKLIRDVHSDSLLRINQYPPVSLKGTKNWDTSKLEAHQLQSENNNNNNNNIGFGEHSDPQILTIMRSNNVDGLQISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFVSVRHRVLTNTTKARMSMMYFAAPPLNWWITPLPKMVTPHNPSLYKPFTWAQYKQAAYSLRLGDARLDLFKIQRQQDTHLIAPAST* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0095 356 SUPERFAMILY Clavaminate synthase-like 6 334 - -
Gso10g0095 356 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 302 IPR005123 -
Gso10g0095 356 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 4 343 - -
Gso10g0095 356 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 85 IPR026992 -
Gso10g0095 356 Pfam 2OG-Fe(II) oxygenase superfamily 205 293 IPR044861 -
Gso10g0095 356 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 343 - -
Gso10g0095 356 Gene3D - 3 331 IPR027443 -
Gso10g0095 356 PRINTS Isopenicillin N synthase signature 37 54 - -
Gso10g0095 356 PRINTS Isopenicillin N synthase signature 218 239 - -
Gso10g0095 356 PRINTS Isopenicillin N synthase signature 254 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0095 Gso-Chr10 1013683 1017956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0095 12 342 Glycosyltransferase AT5G59530 25.364 6.93e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0095 K04125 - gmx:100779525 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0089 2 958226 962571 Gso10g0095 10 1013683 1017956 GST
Gso19g1841 19 47118212 47124083 Gso10g0095 10 1013683 1017956 PCT
Gso3g1877 3 44332177 44337014 Gso10g0095 10 1013683 1017956 PCT
Gso10g0095 10 1013683 1017956 Gso19g1841 19 47118212 47124083 PCT
Gso10g0095 10 1013683 1017956 Gso3g1877 3 44332177 44337014 PCT