Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1841 ATGGTTGTGCCTTCTCCTTCTCCAACTTCTATCAAGACAAGTTACAAGAAAAAGAAGACGATAATAAAAATTCCAACGATAGACCTATCCATGGAAAGGACAGAGTTGTCGGAAACAGTGGTGAAAGCCTGCGAGGAATACGGCTTCTTCAAGGTTGTTAACCACAATGTTCCGAAGGAGGTTATTGCAAGAATGGAAGAAGAGGGTGCAGAGTTTTTTGGCAAAGCCACCTACGAGAAGCGTGGAGCTGGCCCAGCAAGTCCTTTCGGTTATGGCTTCAGCAATATCGGGCCCAACGGAGATATGGGTGACCTAGAGTATCTTCTGCTTCATGCTAACCCTCTTTCCGTCTCTGAGAGATCCAAAACCATCGCTAATGACTCCACCAAGTTCAGTTGTGTTGTGAATGATTATGTAGAAGCAGTAAAAGAAGTAACGTGCGAGATTTTAGATCTGGTGGTTGAGGGATTAGGGGTCCCAGACAAGTTCGCACTAAGCAGGCTCATTAGAGATGTGAATAGTGATTCAGTTCTGAGGATCAATCACTACCCTCCATTGAACCAGAAGGTGAAGGGCAACAAGAATAGCATTGGTTTTGGGGCGCATTCTGACCCTCAGATCTTGACCATCATGCGGTCCAATGACGTGGGTGGGCTTCAAATTTACACCCGTGATGGGTTGTGGATTCCTGTCCCTCCTGACCCCAATCAATTCTTTGTCATGGTGGGTGATGTCTTCCAGGTTTTGACAAATGGAAAGTTCATGAGTGTGAGGCACAGGGCATTAACCAACACATTGAAGGCAAGGATGTCAATGATGTACTTTGCAGCACCACCACTTGATTGGTGGATCACTCCGCTACCCAAGATGGTGTCACCACCACAAAATCCAAGTCTATATAAGCCCTTCACATGGGCCCAGTACAAGAAAGCAACATATTCCTTACGCCTCGGAGATTCTCGACTTGATCTCTTCAAGGCCCAGCTAGATACCCATCATGTATCTGCCTCTCCATCACAAATTCAATGTTAG 1032 0.4603 MVVPSPSPTSIKTSYKKKKTIIKIPTIDLSMERTELSETVVKACEEYGFFKVVNHNVPKEVIARMEEEGAEFFGKATYEKRGAGPASPFGYGFSNIGPNGDMGDLEYLLLHANPLSVSERSKTIANDSTKFSCVVNDYVEAVKEVTCEILDLVVEGLGVPDKFALSRLIRDVNSDSVLRINHYPPLNQKVKGNKNSIGFGAHSDPQILTIMRSNDVGGLQIYTRDGLWIPVPPDPNQFFVMVGDVFQVLTNGKFMSVRHRALTNTLKARMSMMYFAAPPLDWWITPLPKMVSPPQNPSLYKPFTWAQYKKATYSLRLGDSRLDLFKAQLDTHHVSASPSQIQC* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1841 343 SUPERFAMILY Clavaminate synthase-like 15 319 - -
Gso19g1841 343 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 97 IPR026992 -
Gso19g1841 343 Pfam 2OG-Fe(II) oxygenase superfamily 175 277 IPR044861 -
Gso19g1841 343 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 173 278 IPR005123 -
Gso19g1841 343 Gene3D - 3 316 IPR027443 -
Gso19g1841 343 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 328 - -
Gso19g1841 343 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 6 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1841 Gso-Chr19 47118212 47124083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1841 17 326 Glycosyltransferase AT5G59530 28.528 2.13e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1841 K04125 - gmx:100777233 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1841 19 47118212 47124083 Gso3g1877 3 44332177 44337014 GST
Gso19g1841 19 47118212 47124083 Gso2g0089 2 958226 962571 PCT
Gso19g1841 19 47118212 47124083 Gso10g0095 10 1013683 1017956 PCT
Gso2g0089 2 958226 962571 Gso19g1841 19 47118212 47124083 PCT
Gso10g0095 10 1013683 1017956 Gso19g1841 19 47118212 47124083 PCT