Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0047 ATGAAGGTAAGATGGACGACCTCCCTTGACATTGAGGATAGCTCTGTAGATGACTTATGTGGCCTTGTAATGACAGCTAGAAAGTCTGGCAGTTTCAGGATGTCAGATCCTGTAAAGCCTCCACCTTCTAAGAAGTCTCGAAGAGACAGAAGCAGGGGCAAATCATCTGGAAGATCTTGCACAACTGAAGTTATGGAACAAGAAATTTGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTGATTGCACGACTTCCCATTGCCACATTTTTCCGCTTCCGCTCTGTCTGCCGGCAGTGGAATTCCATGCTGACTTCTCAAAGTTTTTCTCTGCATTGTACTCAAGTCACACAAGAAAGCCCATGGTTTTACACCATTACCCATGAAAATGTGAATTCGGGAGCCATGTATGACCCTTCATTGAAAAAATGGCATCACCCAACTATATCAACACCGCCCACAAAATTGATTGTTTTACCCGTGGCTTCTGCTGGCGGTTTAGTTTGCTTCCTTGACATTGGTCATCGAAACTTCTTTGTTTGTAACCCACTGACTCAATCCTTCAAGGAGTTGCCAGTTCGATCAGTTAAGGTCTGGTCTCGTGTTGCTGTAGGGATGACTACAAATGGAAACTCTGTTGGTTCAGGCTACAAGATCTTATGGGTGGGTTGTGATGGAGAATATGAAGTATACGACTCAGTCAGAAATTCTTGGAGTCGTCCGGGAAACATGCCTGCGGGTATGAAGCTGCCATTGTCAATCAACTTTAGGTCTCAAGCTGTCTCTATTGGCAGCACACTTTACTTCATGCGTTCAGACCCAGAAGGGATTGTTTCCTATGATATGGCAACTGGGGTTTGGAAACAATATATAATCCCAGCGCCATTGCATCTGACTGATCACACTCTGGCTGAGTGTGATGGCCAGATCATGCTCGTGGGTTTGCTCACGAAGAATGCAGCCACTTGTGTATGCATATGGGAGTTGCAGAAAATGACTCTCTTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTATGGGAAGCACGTTAGAATGACTTGCCTGGGGAACAAAGGCTTGCTCATGTTGTCCTTGAGATCAAAACAAATGAACCGATTGGTTACTTACAACATAGCAAAGAAAGAATGGCTGAAGGTTCCTGGGTGTGTGGTGCCACGTGGGAGAAAACGACAGTGGATAGCATGTGGTACTGCATTTCATCCATGCCTGACTGCGGTGGCATGA 1260 0.4516 MKVRWTTSLDIEDSSVDDLCGLVMTARKSGSFRMSDPVKPPPSKKSRRDRSRGKSSGRSCTTEVMEQEIWKDFPEDLFEAVIARLPIATFFRFRSVCRQWNSMLTSQSFSLHCTQVTQESPWFYTITHENVNSGAMYDPSLKKWHHPTISTPPTKLIVLPVASAGGLVCFLDIGHRNFFVCNPLTQSFKELPVRSVKVWSRVAVGMTTNGNSVGSGYKILWVGCDGEYEVYDSVRNSWSRPGNMPAGMKLPLSINFRSQAVSIGSTLYFMRSDPEGIVSYDMATGVWKQYIIPAPLHLTDHTLAECDGQIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIAKKEWLKVPGCVVPRGRKRQWIACGTAFHPCLTAVA* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0047 419 SMART fbox_2 73 113 IPR001810 GO:0005515
Gso18g0047 419 PANTHER F-BOX/KELCH-REPEAT PROTEIN 43 418 - -
Gso18g0047 419 MobiDBLite consensus disorder prediction 31 60 - -
Gso18g0047 419 PANTHER BNAA07G08860D PROTEIN 43 418 - -
Gso18g0047 419 Pfam F-box domain 70 109 IPR001810 GO:0005515
Gso18g0047 419 SUPERFAMILY F-box domain 65 143 IPR036047 GO:0005515
Gso18g0047 419 Gene3D - 70 109 - -
Gso18g0047 419 SUPERFAMILY Galactose oxidase, central domain 134 400 IPR011043 -
Gso18g0047 419 Gene3D - 123 406 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0047 Gso-Chr18 417588 422336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0047 - - gmx:100810179 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0047 18 417588 422336 Gso13g1575 13 31064116 31068833 GST
Gso18g0047 18 417588 422336 Gso5g1258 5 36136692 36140605 PCT
Gso18g0047 18 417588 422336 Gso8g0872 8 8110199 8114131 PCT
Gso5g1258 5 36136692 36140605 Gso18g0047 18 417588 422336 PCT
Gso8g0872 8 8110199 8114131 Gso18g0047 18 417588 422336 PCT