Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1191 ATGAGCACTGGGGAGCTTCTCAACATCGAACCTCTCGAACTCAAGTTCCCCTTTGAGCTGAAGAAGCAGATCTCATGTTCTCTTCAATTGTCCAATAAGACCGATAGCTATGTAGCCTTCAAGGTGAAAACAACCAATCCGAAGAAGTATTGTGTTCGTCCGAACACTGGGGTTGTCACGCCTCGATCTACGTGTGATGTTATCGTTACCATGCAAGCGCAAAAAGAGGCTCCTGCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGTGTAAAAACTGTTGATGGTACCAGTCCGAAGGATATCACTGCAGACATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGCTGTATGTTTCTCCACCTCAACCACCGTCTCCAGTCCCAGAAGGTTCGGAGGAAGGATCCTCACCTAGAGGTTCTGTTTCAGAGAATGGAAATGCCAATGGTTCTGACTTCACACAAGCGGCAAGAGGATTTACTGAGCGACCTGAATCTCAAGACAGATCTGCAGAGGCTAGAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAAATAGCAAGCTCTGCCAGGAACTGGAGCTACTGAAGAGGGAAGGCAACAAAAGTCGTGGTGGAGTCTCATTTGTCATTGTCGTATTAATTGGCTTGCTTGGCATAATTATGGGGTATCTCATGAAGACAACCTAA 726 0.4559 MSTGELLNIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGVVTPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGTSPKDITADMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFTQAARGFTERPESQDRSAEARALISRLTEEKNNAIQQNSKLCQELELLKREGNKSRGGVSFVIVVLIGLLGIIMGYLMKTT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1191 241 MobiDBLite consensus disorder prediction 127 161 - -
Gso17g1191 241 MobiDBLite consensus disorder prediction 143 161 - -
Gso17g1191 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Gso17g1191 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Gso17g1191 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Gso17g1191 241 Coils Coil 177 211 - -
Gso17g1191 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Gso17g1191 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Gso17g1191 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Gso17g1191 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1191 Gso-Chr17 11451020 11455456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1191 - - gmx:100805159 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0500 5 5419190 5423699 Gso17g1191 17 11451020 11455456 GST
Gso11g0282 11 2365404 2368700 Gso17g1191 17 11451020 11455456 PCT
Gso17g1191 17 11451020 11455456 Gso1g1749 1 54306128 54310150 PCT
Gso17g1191 17 11451020 11455456 Gso11g0325 11 2733382 2737406 PCT