Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1749 ATGACCGCCTCTCAACTCATCTCCGTTAGTCCCGACGAACTCCGCTTCCATTTTGAGTTGGAGAAGCAAACATTTTGCGATCTTAAGGTCCTCAATAATTCCCAGAACTATGTTGCTTTCAAGGTCAAAACCACTTCACCAAAGAAATACTTTGTGCGACCTAACACCGGCGTTGTACAGCCCTGGGACTCCTGTATCATCAGAGTCACCCTCCAAGCCCAACGGGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAACAGTGAATCCAAATACTGATCTTGATGATCTCCCACCAGATACTTTTAATAAGGAGAGTGGTAATTCAGTAGAGGAGTTGAAATTGAGAGTTGCATATATCTCTCCTACCTCACCTGAAGATGATGCATCAAAGAACTCACAAAGCCTCAATTCCTCTTCTGCTTTACAGAATCTGAAGGAAGAAAGAGATGCCGCTGCCAGACAAACGAGACAGCTGCAACAGGAACTGGACATGCTGAAAAGACGAAGAAACCGAAGAAGTGATCCTGGCTTTTCCTTCACCTTTGCCATTTTTGTGGGTCTCCTTGGAGCTTTACTTGGCTTTCTAATGAAACTTTTATTCTCTTCTCCATCTACAGAATGA 642 0.4361 MTASQLISVSPDELRFHFELEKQTFCDLKVLNNSQNYVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTTVNPNTDLDDLPPDTFNKESGNSVEELKLRVAYISPTSPEDDASKNSQSLNSSSALQNLKEERDAAARQTRQLQQELDMLKRRRNRRSDPGFSFTFAIFVGLLGALLGFLMKLLFSSPSTE* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1749 213 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 210 IPR016763 GO:0005789
Gso1g1749 213 MobiDBLite consensus disorder prediction 131 151 - -
Gso1g1749 213 Pfam MSP (Major sperm protein) domain 7 103 IPR000535 -
Gso1g1749 213 PIRSF VAMP_assoc_prot 134 205 IPR016763 GO:0005789
Gso1g1749 213 PIRSF VAMP_assoc_prot 1 159 IPR016763 GO:0005789
Gso1g1749 213 Gene3D Immunoglobulins 2 130 IPR013783 -
Gso1g1749 213 Coils Coil 148 175 - -
Gso1g1749 213 SUPERFAMILY PapD-like 3 136 IPR008962 -
Gso1g1749 213 MobiDBLite consensus disorder prediction 129 162 - -
Gso1g1749 213 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Gso1g1749 213 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1749 Gso-Chr1 54306128 54310150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1749 - - gmx:100305949 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1749 1 54306128 54310150 Gso11g0325 11 2733382 2737406 GST
Gso5g0500 5 5419190 5423699 Gso1g1749 1 54306128 54310150 PCT
Gso17g1191 17 11451020 11455456 Gso1g1749 1 54306128 54310150 PCT